Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag1998 ATGAAATTCAGCATTTCAATTATACTTCTCTTAATCCTCGCCCCAGCTTTGATCGAATTCATCACAGCAGCAAAGACAGGCAGGAAGAACAATGATGGTGTTTATATTGTGTATATGGGAGCAGCGGCAGCAGCAAATGGTCCTCTACGAGATGATCATTTTCAGCTTCTTAGCTCCATAAGAAGACGGAATCCAAATGCAGTGGTGCACACGTACAAACATGGTTTCTCAGGCTTTGCAGCTAGTCTCTCAGAAAAGGAGGCGCTTTCAGTCGCTAAAAAACCAGGAGTCATTTCAGTTTTTCCTGACCCCATACTAAAACTGCACACTACTCGTTCCTGGGATTTCTTGTTGTCTCAAGGATTCATACGTAGAAAGAGTATTCGTGCATATGATCATCCTAAACCACACTGTCACTCTTCCTTTCCCGGATCCGACATTATCATTGGCTTCTTCGACTCTGGCATTCGGCCCGAGTCGGAGAGCTTTAGTGACAGATACATGGGTCCCATTCCGTCAAGGTGGAAAGGAACCTGCATGGACTCCCCAAATTCCACATCTTCCCACTGTAACAGAAAAATAATTGGAGCAAAGTATTACTATCAAGGTACATTCAATCCTTTTGACTACAATTCACCTTGGGACAAGGTCGGGCACGGGACCCACGTGGCAGCAACAGCAGCCGGTACTCCTGTTGCCAATGCATCCTACTACGGGCTAGTCGAAGGGACAGCCGAAGGTGGGTCTCCCTGCTCACGTATTGCAATGTATAGGGTATGCACACCTGATGGCCATTGTAACGGGTCCACTATGATGGCGGCCTTTGACGATGCCATCTATGATGGAGTCGATATCATATCAATATCGCTCGGTGCAGATGCTTCTAAGAGACCCAAATTCCATGATGATCCAATCGCCCTCGGATCGTTCCATGCTGTGGAGCAGGGAATTACGGTGGTATGTTCTGCAGGAAATAACGGCCCCACACCTGGAACAGCTATGAATGTTGCACCATGGATTATAACGGTTGCTGCCTCTACTATTGATCGAGATTTTCAGTCCTATCTTGTGTTAGGCAATGGCAAAGTAATGAGGGGAGAGAGTATAAATTTCTCCCCTCTCGAAAGAGTTCCAGAATACCCGTTAATTAATGCTGAATCTGCCATGAAAGATGGAGCCTATATAACTGATGCAAGAAATTGTGTCGGAAATTCAATGGATGGAGCAAAGGTGAAGGGGAAGATAGTTGTATGCAACAACGATATCATTAACGACCAACGCTACAGTATCGGTAACAAGATAGGTAATGTGACGAGGCTTGGAGGCATAGGCATTGTATTAGTAGATGACAGATTAAGAGCTGTTGCAAATACTTATGCTTCATTTCCCTTCACTGTCATTTCTTCACATGATGCTGCTCGCCTTCTCTCCTATATAAACAACCCCTCCCCCTTCAGAGATGCAGTAGCAACGATCCTACCAACTGTGGCACTGTCTAACCACAAACATTCACCCGTAATACCGTACTTTTCGTCGAGAGGGCCTTCATTTGACACGAAAAACATACTCAAGCCAGATATTACAGCTCCAGGAGTGGACATTCTTGCAGCCTGGATCGCCAACGATACCAGCACTGTTCCTCAAGGACAAGAGCCCTCGCTCTTTAACATCATCTCTGGAACTTCCATGGCTTGTCCACATATTTCTGGTCTGGCTGCTATTATTAAATCTAAACATCCCACATGGAGTCCTTCTGCTATCAGATCAGCTATCATGACAACAGCAACGCGAATGGACAATCTAGGTGGTCCGATAAAAACAGATGTTGGTATACCGGCCACTCCCTACGATTATGGTGCAGGGGAGGCAACAATAATGGGGGCATTACAACCAGGACTGGTTTATGAAACCAGCTTCTTAGAATACTTGAACTACTTGTGTTACAATGGGTTTGAGCCATCCTCAATAAAGGGCATCTCGAAGAGTGTTCCTGATGATTTTAACTGCCCTCAAGATTCAGATGCTGATTATATATCGAATATCAACTACCCATCGATTGCAATATCCAAATTCAAGGGGGAAGTGGGCAGGAAGATAAGCCGAACAGTGACACACGTAGGGGGTGATGGTGAATCAGTTTACAGTGTCATCGTGGATGGACCTAAAGAAATAAAAGTCGAAGTAATTCCTGAAAAACTGATATTCACAAAGAACGATGAGAAGCATAGTTACCAAGTGGTCTTCTCCTCTGCTAATGCTATAACATCACTGAACAAGGACGTGTTTGGCTCAGTTACATGGACCAGTGGTCAGTATAAAGTAAGGAGTGCATTTGTTGTAAGTAGTAGTTAA 2352 44.73 MKFSISIILLLILAPALIEFITAAKTGRKNNDGVYIVYMGAAAAANGPLRDDHFQLLSSIRRRNPNAVVHTYKHGFSGFAASLSEKEALSVAKKPGVISVFPDPILKLHTTRSWDFLLSQGFIRRKSIRAYDHPKPHCHSSFPGSDIIIGFFDSGIRPESESFSDRYMGPIPSRWKGTCMDSPNSTSSHCNRKIIGAKYYYQGTFNPFDYNSPWDKVGHGTHVAATAAGTPVANASYYGLVEGTAEGGSPCSRIAMYRVCTPDGHCNGSTMMAAFDDAIYDGVDIISISLGADASKRPKFHDDPIALGSFHAVEQGITVVCSAGNNGPTPGTAMNVAPWIITVAASTIDRDFQSYLVLGNGKVMRGESINFSPLERVPEYPLINAESAMKDGAYITDARNCVGNSMDGAKVKGKIVVCNNDIINDQRYSIGNKIGNVTRLGGIGIVLVDDRLRAVANTYASFPFTVISSHDAARLLSYINNPSPFRDAVATILPTVALSNHKHSPVIPYFSSRGPSFDTKNILKPDITAPGVDILAAWIANDTSTVPQGQEPSLFNIISGTSMACPHISGLAAIIKSKHPTWSPSAIRSAIMTTATRMDNLGGPIKTDVGIPATPYDYGAGEATIMGALQPGLVYETSFLEYLNYLCYNGFEPSSIKGISKSVPDDFNCPQDSDADYISNINYPSIAISKFKGEVGRKISRTVTHVGGDGESVYSVIVDGPKEIKVEVIPEKLIFTKNDEKHSYQVVFSSANAITSLNKDVFGSVTWTSGQYKVRSAFVVSSS 783
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 13960673 13963709 + Conep04aG0206300.1 Cone4ag1998 436976
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag1998 783 Pfam Fibronectin type-III domain 680 780 IPR041469 -
Cone4ag1998 783 CDD PA_subtilisin_like 355 492 - -
Cone4ag1998 783 Gene3D Peptidase S8/S53 domain 146 642 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone4ag1998 783 Pfam Subtilase family 144 621 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
Cone4ag1998 783 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 35 777 IPR045051 -
Cone4ag1998 783 CDD Peptidases_S8_3 106 596 IPR034197 -
Cone4ag1998 783 Gene3D - 349 499 - -
Cone4ag1998 783 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 109 IPR037045 -
Cone4ag1998 783 ProSiteProfiles Serine proteases, subtilase domain profile. 120 629 - -
Cone4ag1998 783 Gene3D - 646 783 - -
Cone4ag1998 783 SUPERFAMILY Subtilisin-like 139 630 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone4ag1998 783 PRINTS Subtilisin serine protease family (S8) signature 215 228 IPR015500 -
Cone4ag1998 783 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Cone4ag1998 783 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Cone4ag1998 783 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Cone4ag1998 783 FunFam Subtilisin-like protease SBT1.5 146 358 - -
Cone4ag1998 783 Pfam Peptidase inhibitor I9 34 109 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1998 Cone-Chr4:13960673 Cone5ag1624 Cone-Chr5:11425097 8.82E-163 dispersed
Cone11ag0992 Cone-Chr11:7955867 Cone4ag1998 Cone-Chr4:13960673 9.40E-202 transposed
Cone12ag1227 Cone-Chr12:9526803 Cone4ag1998 Cone-Chr4:13960673 5.05E-140 wgd
Cone3ag1212 Cone-Chr3:30841286 Cone4ag1998 Cone-Chr4:13960673 4.64E-150 wgd
Cone4ag1998 Cone-Chr4:13960673 Cone8ag1278 Cone-Chr8:10541907 8.88E-151 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag1998 K25898 - cit:102616189 869.766