Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag2018 | ATGGCTGGGTCTGACGAGAACAACCCGGGTGTGATTGGACCCGCAAACCTTCATGGGGGCTTGGGCGCTGGAGGGGACAAATTTGTTCTGGGGATCGGCCAAAACCGCAGAGCACTTGGCATCCTCAGTAGCAACATAACTGGAACTCATCCTTATCCTTGTGCTGTCCAAAAGGGAGGCTCGTCAGAGAAGTTTGCCGCCCAGATGACAAGTAAGCCGCAACTACCACCCGAGGAAACTAAGAAACCAATCCAGTTGGTGCCTGCTCCAATTGTAGCTGAAGATTGCACCATTATAGATGTGGATGTCGAAAGTACAAGTAGCGATGTTCCAATGTTTGTGCAACACACAGAAGCGATGTTGGATGAAATTGATCGGATGGAGGAGGTAGAAATGGAAGACATAGCCGAGGAACCCGTTGTGGACATAGACGCTGGTGATAAAAGTAATCCACTTGCAGTTGTTGAGTACATTGATGATATATATGCCTACTACAGAAAGGCGGAGACTTGTAGTTGTGCGCCGCCAAACTATATGACTCTGCAATTGGATATTAATGAAAGAATGAGAGGCATTCTAATTGACTGGCTAATCGAGGTGCATTACAAGTTTGAACTGATGGAAGAGACATTGTACCTCACTGCTAACTTGATCGATAGATTCTTAGCCATTCAACCTGTTGTGAGGAAGAAGCTCCAGCTGGTAGGGGTCACGGCAATGCTTATTGCCTGCAAATATGAAGAAGTTTTTGTTCCAGTTGTGGATGATTTTATTGTGATTTCTGACAAGGCTTACACTAGACAACAAGTGCTCGAGATGGAAAAGTTGATGGTCAATAGCTTACAATTTAATCTCTCAGTTCCGACCCCTTACGTGTTTATGAGAAGGTTTCTGAAAGCAGCTCAATCAGACAAAAAACTGGAGTTGCTGTCGTTCTTCATGATGGAGCTATGCCTAGTAGAATATGAAATGCTAAAGCATGCACCGTCTCTGTTAGCTGCTGCTGCAATATTCACGGCTCAATGTTCAATTAGTGGATATCAACAGTGGAGCATGACCAGTGAGTGGCACACCATCTACTCAGAAAACCAGCTTTTGGAATGCTCGAAGATGATGGTATGTTTGCATCAAAAGGCAGGGACAGGGAAGCTGACAGGAGTTCACAGAAAGTACTCTACGTCCAAGTATGGCTATGCTGCTGCTACATCAGAGCCTGCTAACTTCCTGTTGGAGTGA | 1236 | 45.31 | MAGSDENNPGVIGPANLHGGLGAGGDKFVLGIGQNRRALGILSSNITGTHPYPCAVQKGGSSEKFAAQMTSKPQLPPEETKKPIQLVPAPIVAEDCTIIDVDVESTSSDVPMFVQHTEAMLDEIDRMEEVEMEDIAEEPVVDIDAGDKSNPLAVVEYIDDIYAYYRKAETCSCAPPNYMTLQLDINERMRGILIDWLIEVHYKFELMEETLYLTANLIDRFLAIQPVVRKKLQLVGVTAMLIACKYEEVFVPVVDDFIVISDKAYTRQQVLEMEKLMVNSLQFNLSVPTPYVFMRRFLKAAQSDKKLELLSFFMMELCLVEYEMLKHAPSLLAAAAIFTAQCSISGYQQWSMTSEWHTIYSENQLLECSKMMVCLHQKAGTGKLTGVHRKYSTSKYGYAAATSEPANFLLE | 411 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 14050059 | 14053066 | - | Conep04aG0208300.1 | Cone4ag2018 | 436996 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag2018 | 411 | Gene3D | - | 174 | 286 | - | - | |
Cone4ag2018 | 411 | PANTHER | CYCLINS | 138 | 392 | IPR039361 | GO:0000079(PANTHER)|GO:0000307(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0016538(PANTHER)|GO:0044772(PANTHER) | |
Cone4ag2018 | 411 | SMART | cyclin_7 | 195 | 279 | IPR013763 | - | |
Cone4ag2018 | 411 | SMART | cyclin_7 | 292 | 374 | IPR013763 | - | |
Cone4ag2018 | 411 | Gene3D | - | 160 | 400 | - | - | |
Cone4ag2018 | 411 | SMART | Cyclin_C_2 | 288 | 405 | IPR004367 | - | |
Cone4ag2018 | 411 | CDD | CYCLIN_AtCycB-like_rpt1 | 137 | 283 | - | - | |
Cone4ag2018 | 411 | FunFam | G2/mitotic-specific cyclin-1 | 275 | 400 | - | - | |
Cone4ag2018 | 411 | Pfam | Cyclin, N-terminal domain | 160 | 286 | IPR006671 | - | |
Cone4ag2018 | 411 | SUPERFAMILY | Cyclin-like | 287 | 403 | IPR036915 | - | |
Cone4ag2018 | 411 | SUPERFAMILY | Cyclin-like | 149 | 285 | IPR036915 | - | |
Cone4ag2018 | 411 | Pfam | Cyclin, C-terminal domain | 288 | 404 | IPR004367 | - | |
Cone4ag2018 | 411 | CDD | CYCLIN_AtCycB-like_rpt2 | 288 | 400 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag2018 | Cone-Chr4:14050059 | Cone6ag1701 | Cone-Chr6:12844184 | 4.73E-144 | dispersed | |
Cone12ag0859 | Cone-Chr12:7710310 | Cone4ag2018 | Cone-Chr4:14050059 | 3.71E-128 | wgd | |
Cone17ag1451 | Cone-Chr17:9849759 | Cone4ag2018 | Cone-Chr4:14050059 | 1.02E-161 | wgd | |
Cone20ag0025 | Cone-Chr20:155965 | Cone4ag2018 | Cone-Chr4:14050059 | 2.02E-139 | wgd | |
Cone4ag2018 | Cone-Chr4:14050059 | Cone7ag1934 | Cone-Chr7:12340108 | 3.09E-254 | wgd | |
Cone4ag2018 | Cone-Chr4:14050059 | Cone8ag0889 | Cone-Chr8:8686330 | 4.18E-136 | wgd | |
Cone4ag2018 | Cone-Chr4:14050059 | Cone9ag1624 | Cone-Chr9:11579755 | 2.82E-90 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag2018 | K21777 | - | rcu:8273611 | 575.474 |