Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone4ag2029 | ATGTTTGCTCTAGTACTTGATGACCATGGTGGGACAGATGCAGCGTCATTAGTCAGAAATAATATTGTTAGATTCATAGTTGAGGACTCCTATTCTCCACTTTGCGTGAAGAAGGCGATCAAGGGTGCATTTTTGAAAGCGGATTATGCATTTGCAGTCGCTAGTTCGCTAGACATATCCTCTGGTACAACTGCTTTGACCGCAATTATCTTCGGAAGGACAATGATAATTGCCAATGCAGGAGACTGTCGAGCTGTTCTTGGGAGACGGGGTAGAGCCATCGAGATGTCTAAGGATCACAAACCTGATTGCACATCTGAAAGACTAAGGATTGAGAAACTTGGAGTCATTTATGATGGCTACCTCAATGTGCAGTTGGCGGTTGGACATGCCATAGGGGACTGGCATATGAAAGGTTGCCAAGGGATCCATATGCCCATTAAGTGCAGAGCAAGAGTTGCAGGAAATGCACTGATTGAGGATGATTAG | 489 | 44.79 | MFALVLDDHGGTDAASLVRNNIVRFIVEDSYSPLCVKKAIKGAFLKADYAFAVASSLDISSGTTALTAIIFGRTMIIANAGDCRAVLGRRGRAIEMSKDHKPDCTSERLRIEKLGVIYDGYLNVQLAVGHAIGDWHMKGCQGIHMPIKCRARVAGNALIEDD | 162 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 14086911 | 14087602 | - | Conep04aG0209400.1 | Cone4ag2029 | 437007 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone4ag2029 | 162 | PANTHER | PROTEIN PHOSPHATASE 2C | 2 | 140 | IPR015655 | GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER) | |
Cone4ag2029 | 162 | Pfam | Protein phosphatase 2C | 4 | 139 | IPR001932 | - | |
Cone4ag2029 | 162 | Gene3D | - | 1 | 155 | IPR036457 | - | |
Cone4ag2029 | 162 | ProSiteProfiles | PPM-type phosphatase domain profile. | 1 | 162 | IPR001932 | - | |
Cone4ag2029 | 162 | SMART | PP2C_4 | 1 | 159 | IPR001932 | - | |
Cone4ag2029 | 162 | CDD | PP2Cc | 1 | 138 | IPR001932 | - | |
Cone4ag2029 | 162 | SUPERFAMILY | PP2C-like | 2 | 138 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone4ag2029 | Cone-Chr4:14086911 | Cone8ag0907 | Cone-Chr8:8797371 | 8.87E-69 | dispersed | |
Cone4ag2029 | Cone-Chr4:14086911 | Cone7ag1942 | Cone-Chr7:12392172 | 3.01E-81 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone4ag2029 | K14803 | - | rcu:8273638 | 230.335 |