Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag2029 ATGTTTGCTCTAGTACTTGATGACCATGGTGGGACAGATGCAGCGTCATTAGTCAGAAATAATATTGTTAGATTCATAGTTGAGGACTCCTATTCTCCACTTTGCGTGAAGAAGGCGATCAAGGGTGCATTTTTGAAAGCGGATTATGCATTTGCAGTCGCTAGTTCGCTAGACATATCCTCTGGTACAACTGCTTTGACCGCAATTATCTTCGGAAGGACAATGATAATTGCCAATGCAGGAGACTGTCGAGCTGTTCTTGGGAGACGGGGTAGAGCCATCGAGATGTCTAAGGATCACAAACCTGATTGCACATCTGAAAGACTAAGGATTGAGAAACTTGGAGTCATTTATGATGGCTACCTCAATGTGCAGTTGGCGGTTGGACATGCCATAGGGGACTGGCATATGAAAGGTTGCCAAGGGATCCATATGCCCATTAAGTGCAGAGCAAGAGTTGCAGGAAATGCACTGATTGAGGATGATTAG 489 44.79 MFALVLDDHGGTDAASLVRNNIVRFIVEDSYSPLCVKKAIKGAFLKADYAFAVASSLDISSGTTALTAIIFGRTMIIANAGDCRAVLGRRGRAIEMSKDHKPDCTSERLRIEKLGVIYDGYLNVQLAVGHAIGDWHMKGCQGIHMPIKCRARVAGNALIEDD 162
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14086911 14087602 - Conep04aG0209400.1 Cone4ag2029 437007
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag2029 162 PANTHER PROTEIN PHOSPHATASE 2C 2 140 IPR015655 GO:0004722(InterPro)|GO:0006470(InterPro)|GO:0006470(PANTHER)
Cone4ag2029 162 Pfam Protein phosphatase 2C 4 139 IPR001932 -
Cone4ag2029 162 Gene3D - 1 155 IPR036457 -
Cone4ag2029 162 ProSiteProfiles PPM-type phosphatase domain profile. 1 162 IPR001932 -
Cone4ag2029 162 SMART PP2C_4 1 159 IPR001932 -
Cone4ag2029 162 CDD PP2Cc 1 138 IPR001932 -
Cone4ag2029 162 SUPERFAMILY PP2C-like 2 138 IPR036457 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag2029 Cone-Chr4:14086911 Cone8ag0907 Cone-Chr8:8797371 8.87E-69 dispersed
Cone4ag2029 Cone-Chr4:14086911 Cone7ag1942 Cone-Chr7:12392172 3.01E-81 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag2029 K14803 - rcu:8273638 230.335