Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone4ag2032 ATGGCTGGAGGAGGCGGAGGGGGTCCGGTTAGGCAGCTAGATCAGACGCCCACATGGGCTGTCGCTGCTATTTGTGCCATTATGGTTCTTCTTTCTATCATCCTTGAGAAAGTTATTCATCACATCGGAGAGTGGTTTCAAGAAAAGAGAAAGAATGCTCTGTTTGAAGCACTTGAGAAAGTAAAGGACGAGCTTATGGTGTTGGGATTCATTTCATTGATGTTGACATTCGGGCAATCGTACATTGCCCAAATTTGCGTACCCTTCAAGTATATAGACACGATGTTACCCTGTAAACATAGGGACGGTCATAATGGGGCTGACCAGCATGTTAAGGCCGAGCATCGACGCAGGCTTCTCTGGCATGACCATAGAATTCTTGCTGGGTCGGTTGCTGTTGAATGCAAGCGAGGACATGTGCCCATGATATCGCTGAACGGTCTGCATCAGTTACACATCTTCATCTTCTTTCTAGCTCTCTTCCACGTGATGTATAGTGCCATAACTATGATGCTTGGAAGGTTAAAGACTCGTGCATGGAAGGAATGGGAAGATGAGTGCTTGCAGGAAACTGATCAGATGAATGATCCCAAGAGATTCAGGCTTACTCACGAGACATCCTTTGTGAGAGACCACACAAGTTCCATGTATAAAACACCCTTCACCGCTTATCTTGCTTGTTTCTTTCGACAATTCTTCAGGTCCGTACGTAAGGCTGATTACCTGACCATGCGACATGCGTTCATTAGTGTTCACTTAGCACCTGGAAGCAAGTTTAACTTTCAAAAATATATCAGAAGGTCACTAGAAGAGGACTTTAAGGTGGTGGTGGGAATCAGTCCACTTTTATGGGCTACGGTGGTGCTTTATCTGCTTGTGAATGTCAGTGGATGGTACGTTATGATTGCAGTGACCTTAGTCCCTCTAATAGTAATCTTAGCAGTTGGGACGAAGCTTCAAGCGATTATAACACAAATGGCAGTTGAAATCACGCAGAAGCATGTGGTGGTACAGGGGATACCTCTGGTCCAAGTTTCTGATAAACATTTCTGGTTTAGTTGGCCCCAGTTAGTTCTCTATCTCATCCATTTTGTGCTTTTTCAGAATGCATTTGGGATAACATATTTCTTCTGGATATGGTATGAGTTTGGGTTGAGGTCCTGTTTTCACGCAAACTTTCCTCTCACACTTGCAAGAGCGGCTCTTGGGGTAGCGGTCCAAGTTCTGTGCAGCTACATCACACTTCCGCTATATGCCCTTGTTACGCAGATGGGATCCACAATGAAGAAGTCAATATTTGACGAGCATACAGCCAAGGCCCTAAAAAGATGGCGGAAAAAGGCAGTAGAAAGGAAGCATGAAGGGAAGGGAAGGCCTCCGCCACTGACCCAAACATTGGGTAGCCCCATCGACATGGATTCGCCCACTGATTCCCCTGCTGCTCCGTAA 1449 45.82 MAGGGGGGPVRQLDQTPTWAVAAICAIMVLLSIILEKVIHHIGEWFQEKRKNALFEALEKVKDELMVLGFISLMLTFGQSYIAQICVPFKYIDTMLPCKHRDGHNGADQHVKAEHRRRLLWHDHRILAGSVAVECKRGHVPMISLNGLHQLHIFIFFLALFHVMYSAITMMLGRLKTRAWKEWEDECLQETDQMNDPKRFRLTHETSFVRDHTSSMYKTPFTAYLACFFRQFFRSVRKADYLTMRHAFISVHLAPGSKFNFQKYIRRSLEEDFKVVVGISPLLWATVVLYLLVNVSGWYVMIAVTLVPLIVILAVGTKLQAIITQMAVEITQKHVVVQGIPLVQVSDKHFWFSWPQLVLYLIHFVLFQNAFGITYFFWIWYEFGLRSCFHANFPLTLARAALGVAVQVLCSYITLPLYALVTQMGSTMKKSIFDEHTAKALKRWRKKAVERKHEGKGRPPPLTQTLGSPIDMDSPTDSPAAP 482
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 14113354 14116677 + Conep04aG0209700.1 Cone4ag2032 437010
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone4ag2032 482 PANTHER MLO-LIKE PROTEIN 1 8 456 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
Cone4ag2032 482 MobiDBLite consensus disorder prediction 449 482 - -
Cone4ag2032 482 Pfam Mlo family 11 457 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0294 Cone-Chr14:1343657 Cone4ag2032 Cone-Chr4:14113354 2.30E-125 dispersed
Cone15ag0319 Cone-Chr15:1458527 Cone4ag2032 Cone-Chr4:14113354 4.04E-127 dispersed
Cone19ag0700 Cone-Chr19:5846312 Cone4ag2032 Cone-Chr4:14113354 1.98E-37 dispersed
Cone3ag0284 Cone-Chr3:1481175 Cone4ag2032 Cone-Chr4:14113354 6.87E-128 dispersed
Cone4ag2032 Cone-Chr4:14113354 Cone5ag1684 Cone-Chr5:11984829 1.05E-123 dispersed
Cone17ag0705 Cone-Chr17:4866579 Cone4ag2032 Cone-Chr4:14113354 5.14E-62 transposed
Cone17ag0706 Cone-Chr17:4873422 Cone4ag2032 Cone-Chr4:14113354 8.60E-103 transposed
Cone12ag0880 Cone-Chr12:7840982 Cone4ag2032 Cone-Chr4:14113354 8.62E-208 wgd
Cone17ag1466 Cone-Chr17:9928988 Cone4ag2032 Cone-Chr4:14113354 5.12E-150 wgd
Cone4ag2032 Cone-Chr4:14113354 Cone8ag0911 Cone-Chr8:8829345 3.97E-205 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone4ag2032 K08472 - csv:101208890 671.774