Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0001 ATGGATATTGGTGCACTGGAGATTGGAGACTATCTTGCAATTGGGGCAATATTTGCTGCTACAGATTCTGTTTGCACATTGCAGATTCTCAATCAGGATGAGACACCTTTACTCTACAGTCTTGTTTTTGGGGAGGGTGTAGTAAACGATGCTACATCTGTGGTGCTTTTCAATGCAATTCAGAGCTTTGATCTCACTAATATCAATCCGAGAACCGCTTTACAGTTTGCTGAAAACTTCTTCTATTTGTTTTTTACAAGTACCATTCTTGGAGTATTTTCTGGGCTGCTCAGTGCTTATATTATTAAAAAGCTTTACATTGGGAGGCACTCTACCGATCGTGAGGTTGCTCTTATGATACTCATGGCATACCTTTCCTATATGCTGGCAGAATTATTCTATCTCAGTGGTATTCTCACAGTGTTCTTTTGCGGGATTGTAATGTCTCATTACACCTGGCACAATGTCACAGAGAGTTCAAGAATCACCACCAAGCATGCTTTCGCTACCTTGTCATTTGTTGCTGAGATTTTTATCTTCCTTTATGTTGGTATGGACGCAATGGATATAGAGAAATGGAGATTTGTTAGTGATAGTCCTGGGACATCAGTGGGAGTGAGTTCAATATTGATAGGTCTGGTTATGGCTGGGAGAGCAGCTTTTGTTTTTCCCTTATCATTTTTATCCAACTTATCCAAAAAGAACCCTGCAGCTAAAATCAGCATAAGACAGCAAGTTATAATATGGTGGGCTGGTCTAATGAGAGGCGCTGTCTCAATAGCTCTTGCTTACAATCAGTTCACAAGATTAGGGCATACTCAATTGCGAGCTAATGCAATCATGATCACCAGTACCATAACTGTTGTTCTTTTCAGCACAGTGGTGTTCGGATTATTGACCAAGCCACTTATAAGATTCTTACTGCCTCAACAAAAACACAGCACCAGCACAATATTATCTGATCCATCAACACCAAAATCATTCATCATTCCTCTTCTCGGACAAGAATCCGAACAGGATCTTGTTCTCCCTGACATCCACCGGCCAGGCAGCATCCGGGATCTCCTAACAACCCCAACACATACTGTCCATAGGTACTGGCGTAGATTTGACAATGCTTTCATGCGTCCAGTGTTTGGTGGCCGGGGTTTTGTTCCTTTTGTTCCTGGATCGCCCACGGAAAGGAGTGCTCATGAAACAGAATGA 1206 42.04 MDIGALEIGDYLAIGAIFAATDSVCTLQILNQDETPLLYSLVFGEGVVNDATSVVLFNAIQSFDLTNINPRTALQFAENFFYLFFTSTILGVFSGLLSAYIIKKLYIGRHSTDREVALMILMAYLSYMLAELFYLSGILTVFFCGIVMSHYTWHNVTESSRITTKHAFATLSFVAEIFIFLYVGMDAMDIEKWRFVSDSPGTSVGVSSILIGLVMAGRAAFVFPLSFLSNLSKKNPAAKISIRQQVIIWWAGLMRGAVSIALAYNQFTRLGHTQLRANAIMITSTITVVLFSTVVFGLLTKPLIRFLLPQQKHSTSTILSDPSTPKSFIIPLLGQESEQDLVLPDIHRPGSIRDLLTTPTHTVHRYWRRFDNAFMRPVFGGRGFVPFVPGSPTERSAHETE 401
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 14717 17530 + Conep05aG0000100.1 Cone5ag0001 437019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0001 401 Gene3D - 8 59 - -
Cone5ag0001 401 PANTHER SODIUM/HYDROGEN EXCHANGER 6 392 IPR018422 GO:0005886(PANTHER)|GO:0006812(InterPro)|GO:0015385(PANTHER)|GO:0015385(InterPro)|GO:0015386(PANTHER)|GO:0016020(InterPro)|GO:0051453(PANTHER)|GO:0071805(PANTHER)|GO:0090333(PANTHER)|GO:0098719(PANTHER)|GO:1902600(InterPro)
Cone5ag0001 401 Pfam Sodium/hydrogen exchanger family 6 304 IPR006153 GO:0006812(InterPro)|GO:0015297(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)|GO:1902600(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0001 Cone-Chr5:14717 Cone7ag0181 Cone-Chr7:761678 5.92E-203 dispersed
Cone1ag1776 Cone-Chr1:58371527 Cone5ag0001 Cone-Chr5:14717 5.17E-279 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0001 - - - 0.0