Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0013 ATGGATGGAAGTAATGAAGTCAATATCAGTGAGTCCAAGAGGGTGGTCCCACTAAATACATGGGTTCTCATCTCCAACTTCAAGTTGTCCTACAAGCTTCTCCGCCGCCCTGATGGCACCTTCAACCGCCACCTGGCAGAGTTTCTCGACCGGAAAGTCTCAGCCAATGCCAATCCTGTAGATGGTGTTTTCTCATTCGATGTCATAATTGATCGTGGGACCAGCCTCCTGAGCAGAATCTATCGCCCCTCAAGTCGGGAAGAACCTCACCCAAAATTATCTGATCTTGAGAAGGCAGTTAGTACCGAAAAGGTTGTTCCTGTCATCATTTTCTTCCACGGTGGAAGCTTCACACACTCCTCTGCTAATAGTGCCATATACGATACTCTCTGTAGGCGACTAGTGGGCATTTGTAAAGCCGTTGTGGTCTCTGTAAATTACAGGCGTGCCCCTGAGAATCCATACCCATGTGCATATGATGATGGATGGACAGCTTTTAACTGGGTCAATTCAAGATCATGGCTTCAAAGTAGAGATTCAAAGGCTCACATATATCTGGCTGGAGATAGTTCAGGTGGGAATATCGTTCACAATGTTGCTTTAAGAGCAGGGGAGTCAAAAATTGAAGTGTTAGGGAATATTCTCCTTAATCCGCTTTTTGGTGGGCAGGAGAGGACTAAGTCCGAGATTGAGTTAAATGGGAGATACTTTGTTACTCTCCAAGGCAGGGATTGGTATTGGAGAGCTTTTCTTCCTGAAGGGGAAGATAGAGACCATCCGGCATGTAACCCTTTCGGGCCTAAGGGTCAAAGCCTTGAAGGCTTCAAGTTTCCTAGGAGCCTTGTTGTAGTAGCTGGTTTGGACCTTATTCAAGATTGGCAATTGGGTTATGTTAAAGGGCTTGAGAAGGCTAATCAAGAAGTGAAACTCTTGTATCTTGAGCGAGCGACAATTGGCTTTTACTTGCTGCCGAACAATGTCCATTTCTATACTGTTATGGATGAGATAAAAGAATTTGTGAGTTCAGACTGTTAA 1035 44.93 MDGSNEVNISESKRVVPLNTWVLISNFKLSYKLLRRPDGTFNRHLAEFLDRKVSANANPVDGVFSFDVIIDRGTSLLSRIYRPSSREEPHPKLSDLEKAVSTEKVVPVIIFFHGGSFTHSSANSAIYDTLCRRLVGICKAVVVSVNYRRAPENPYPCAYDDGWTAFNWVNSRSWLQSRDSKAHIYLAGDSSGGNIVHNVALRAGESKIEVLGNILLNPLFGGQERTKSEIELNGRYFVTLQGRDWYWRAFLPEGEDRDHPACNPFGPKGQSLEGFKFPRSLVVVAGLDLIQDWQLGYVKGLEKANQEVKLLYLERATIGFYLLPNNVHFYTVMDEIKEFVSSDC 344
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 82981 85471 + Conep05aG0001300.1 Cone5ag0013 437031
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0013 344 SUPERFAMILY alpha/beta-Hydrolases 25 340 IPR029058 -
Cone5ag0013 344 Gene3D alpha/beta hydrolase 1 342 IPR029058 -
Cone5ag0013 344 PANTHER ARYLACETAMIDE DEACETYLASE 36 325 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
Cone5ag0013 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 109 125 IPR002168 GO:0016787(InterPro)
Cone5ag0013 344 Pfam alpha/beta hydrolase fold 109 321 IPR013094 GO:0016787(InterPro)
Cone5ag0013 344 FunFam Gibberellin receptor GID1 1 342 - -
Cone5ag0013 344 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0013 Cone-Chr5:82981 Cone6ag1219 Cone-Chr6:9551449 1.55E-61 dispersed
Cone1ag1766 Cone-Chr1:58324334 Cone5ag0013 Cone-Chr5:82981 1.62E-252 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0013 K14493 - rcu:8288487 578.556