Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone5ag0033 | ATGTCAGCTGATAAACGTCCAAAACCTTCAAGTATTGACGAGGAGCAATTTATGTGCGTATTTTACGAAAATAAACTTCAAGAAGTGTGCAGCAACTTTCACTTTCCTCACAAAATTCAGGCTACAGCTCTGATACATTTCAAAAGATTCTATCTACAATGGTCAGTAATGCAGCACAATCCCAAAAACATAATGTTAACCTGCATATATGCAGCTTGTAAAATAGAAGAAAATCATGCCTCAGCTGAGGAGCTTGTTAAGGGAATCTCCCAGGATCATCAAATGATTCTCAATTATGAGATGATAGTTTATCAGGCATGGATGCGCCTCTCGTTCAATTCTTGTCTCTATTAG | 354 | 37.57 | MSADKRPKPSSIDEEQFMCVFYENKLQEVCSNFHFPHKIQATALIHFKRFYLQWSVMQHNPKNIMLTCIYAACKIEENHASAEELVKGISQDHQMILNYEMIVYQAWMRLSFNSCLY | 117 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 201237 | 201862 | + | Conep05aG0003300.1 | Cone5ag0033 | 437051 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone5ag0033 | 117 | Pfam | Cyclin, N-terminal domain | 26 | 103 | IPR006671 | - | |
| Cone5ag0033 | 117 | Gene3D | - | 1 | 112 | - | - | |
| Cone5ag0033 | 117 | FunFam | cyclin-H1-1 | 1 | 114 | - | - | |
| Cone5ag0033 | 117 | SUPERFAMILY | Cyclin-like | 3 | 105 | IPR036915 | - | |
| Cone5ag0033 | 117 | PANTHER | CYCLIN | 20 | 106 | IPR043198 | GO:0000079(PANTHER)|GO:0005634(PANTHER)|GO:0006357(InterPro)|GO:0006357(PANTHER)|GO:0016538(InterPro)|GO:0016538(PANTHER)|GO:0070816(PANTHER)|GO:0070985(PANTHER) | |
| Cone5ag0033 | 117 | SMART | cyclin_7 | 24 | 105 | IPR013763 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone16ag0303 | Cone-Chr16:3502077 | Cone5ag0033 | Cone-Chr5:201237 | 1.47E-65 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone5ag0033 | K06634 | - | csv:101220754 | 193.741 |