Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0040 | ATGAAAATCGCAATGTCAGGGAAGAACATGGCGGCGGTGTTCTTGTTTCTCTTTCTAGCAGGGTTCTTATCTGGCATAGCAACAGCAGCTGATGATTCTTCACAGAAGTTGGGAACCGTGATCGGAATCGATCTCGGTACTACTTATTCATGTGTCGGTGTGTACAAGAACGGTAATGTCGAGATTATAGCGAACGATCAGGGAAACAGAATAACGCCCTCATGGGTCGCATTCACCGACTCCGAGCGTTTGATTGGAGAGGCGGCTAAAAATCAAGCTCCTCTCAATGCAGAGCGTACGATTTTCGACGTGAAGCGGCTTATTGGAAGAAGGTTTGATGATGCTGAGGTCCAGAGAGATATCAAGTTTTTACCATACAAGGTTGTCAATAAAGATGGGAAGCCTTATATTCAGGTTAAAGTTAAAGGTGAAACCAAGGCGTTTAGCCCTGAAGAAATCAGTGCTATGATCCTAGGGAAGATGAAAGAAACAGCTGAAGCATACTTGGGCAAGAAAATCAAAGATGTTGTCGTGACAGTTCCAGCTTATTTTAATGATGCACAAAGGCAAGCCACCAAGGACGCAGGTGTCATAGCGGGGCTAAATGTGGCCCGAATAATCAACGAGCCCACGGCAGCCGCTATAGCCTATGGATTAGACAAGAAGGGAGGAGAGAAAAATATATTGGTCTTTGATCTAGGTGGCGGTACATTTGATGTAAGCATCTTGACCATTGACAATGGTGTCTTTGAGGTCCTGTCTACAAGTGGAGACACCCATTTAGGAGGAGAAGACTTTGACCATAGAGTGATGGATTATTTCATCCAGTTGATCAAGAAGAAATATAACAAAGACGTCAGCAAGGATAACAAGGCTCTTGGCAAGCTTCGTCGTGAATGTGAAAGGGCTAAGAGAGCATTGAGTAGCCAACATCAAGTCCGAGTCGAGATTGAATCACTTTTCGATGGCGTAGATTTCTCTGAGCCCTTAACACGGGCCCGCTTTGAGGAGTTAAACATAGACTTGTTTAAGAAGACAATGGGGCCTGTTAAGAAGGCATTGGAAGATGCCGGGCTGAAGAAAACCAATATTGACGAGATTGTCTTGGTTGGAGGGAGTACTAGAATCCCTAAAGTTCAACAACTTTTGAAGGATTTCTTTGATGGGAAAGAGCCGAATAAAGGGGTTAATCCTGATGAGGCCGTTGCTTATGGTGCTGCCGTTCAAGGTGGAATTCTTAGTGGTGAAGGCGGCGAGGGGACTAAAGGTCTTCTTTTGTTGGATGTGACTCCTTTGAGTTTAGGTATTGAAACAGTCGGCGGTGTTATGACAAAACTGATCCCTAGGAATACTGTTATCCCTACTAAGAAATCTCAGATATTTTCCACGTACCAAGATCAACAAACCACCGTTTCTATCAAAGTATATGAAGGTGAAAGGAGCTTGACAAAGGATTGTCGCGAGCTCGGACAATTTGATCTCACTGGCATTCCACCCGCTCCAAGGGGTGTGCCTCAAATTGAAGTAACATTCGAGGTAGATGAAAATGGGATTCTACATGTGACAGCAAAGGATAAGGCTGGGAAGAGGTCACAATCAATCACCATTACTAACGATAAAGGACGGCTGAGTCAAGAAGAGATAGATCGGATGGTGAAGGAAGCGGAGGAATTCGCAGAAGAGGATAAGAAGGTGAAGGAGAAGATTGATGCAAGGAACAAGCTGGAAACATATATATACAACTTGAGGAGCAGCATTGATGATAAGGATAAATTAGCTGATAAAATTGATTCAGATGACAAGGAGAAGATTGATAGCGCGTTGAAGGAGGCGCTTGAATGGTTGGATGATAATCAGAATGCGGAGAAAGATGATTTTGATGACAAGTATAAAGAGGTTGAGGCTGTTTGTAATCCAATTATTAAGAAGGTTTATAAGAAAAGTGGTGGAAGTTCATCTGTTTCCGAAGAAGAAGGTGAAGAACCCAATGATGAGCTGTGA | 2001 | 43.48 | MKIAMSGKNMAAVFLFLFLAGFLSGIATAADDSSQKLGTVIGIDLGTTYSCVGVYKNGNVEIIANDQGNRITPSWVAFTDSERLIGEAAKNQAPLNAERTIFDVKRLIGRRFDDAEVQRDIKFLPYKVVNKDGKPYIQVKVKGETKAFSPEEISAMILGKMKETAEAYLGKKIKDVVVTVPAYFNDAQRQATKDAGVIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLSTSGDTHLGGEDFDHRVMDYFIQLIKKKYNKDVSKDNKALGKLRRECERAKRALSSQHQVRVEIESLFDGVDFSEPLTRARFEELNIDLFKKTMGPVKKALEDAGLKKTNIDEIVLVGGSTRIPKVQQLLKDFFDGKEPNKGVNPDEAVAYGAAVQGGILSGEGGEGTKGLLLLDVTPLSLGIETVGGVMTKLIPRNTVIPTKKSQIFSTYQDQQTTVSIKVYEGERSLTKDCRELGQFDLTGIPPAPRGVPQIEVTFEVDENGILHVTAKDKAGKRSQSITITNDKGRLSQEEIDRMVKEAEEFAEEDKKVKEKIDARNKLETYIYNLRSSIDDKDKLADKIDSDDKEKIDSALKEALEWLDDNQNAEKDDFDDKYKEVEAVCNPIIKKVYKKSGGSSSVSEEEGEEPNDEL | 666 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 217216 | 220152 | - | Conep05aG0004000.1 | Cone5ag0040 | 437058 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 39 | 52 | - | - | |
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 67 | 79 | - | - | |
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 504 | 520 | - | - | |
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 423 | 442 | - | - | |
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 236 | 246 | - | - | |
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 176 | 196 | - | - | |
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 89 | 97 | - | - | |
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 396 | 416 | - | - | |
Cone5ag0040 | 666 | PRINTS | 70kDa heat shock protein signature | 364 | 380 | - | - | |
Cone5ag0040 | 666 | Gene3D | - | 41 | 411 | - | - | |
Cone5ag0040 | 666 | FunFam | Heat shock protein 70 | 573 | 647 | - | - | |
Cone5ag0040 | 666 | ProSitePatterns | Heat shock hsp70 proteins family signature 3. | 367 | 381 | IPR018181 | - | |
Cone5ag0040 | 666 | FunFam | Heat shock protein 70 | 41 | 231 | - | - | |
Cone5ag0040 | 666 | Coils | Coil | 604 | 624 | - | - | |
Cone5ag0040 | 666 | CDD | HSPA5-like_NBD | 38 | 411 | IPR042050 | - | |
Cone5ag0040 | 666 | PANTHER | HEAT SHOCK PROTEIN 70KDA | 40 | 610 | IPR013126 | GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005788(PANTHER)|GO:0016020(PANTHER)|GO:0030433(PANTHER)|GO:0030968(PANTHER)|GO:0034663(PANTHER)|GO:0140662(InterPro) | |
Cone5ag0040 | 666 | Coils | Coil | 548 | 568 | - | - | |
Cone5ag0040 | 666 | Pfam | Hsp70 protein | 40 | 646 | IPR013126 | GO:0005524(InterPro)|GO:0140662(InterPro) | |
Cone5ag0040 | 666 | ProSitePatterns | Heat shock hsp70 proteins family signature 2. | 230 | 243 | IPR018181 | - | |
Cone5ag0040 | 666 | SUPERFAMILY | Heat shock protein 70kD (HSP70), C-terminal subdomain | 570 | 651 | IPR029048 | - | |
Cone5ag0040 | 666 | Gene3D | - | 573 | 646 | IPR029048 | - | |
Cone5ag0040 | 666 | SUPERFAMILY | Actin-like ATPase domain | 224 | 415 | IPR043129 | - | |
Cone5ag0040 | 666 | MobiDBLite | consensus disorder prediction | 646 | 666 | - | - | |
Cone5ag0040 | 666 | FunFam | Heat shock 70 kDa | 418 | 572 | - | - | |
Cone5ag0040 | 666 | ProSitePatterns | Heat shock hsp70 proteins family signature 1. | 43 | 50 | IPR018181 | - | |
Cone5ag0040 | 666 | Gene3D | Substrate Binding Domain Of DNAk; Chain A, domain 1 | 418 | 572 | IPR029047 | - | |
Cone5ag0040 | 666 | FunFam | Heat shock 70 kDa | 262 | 345 | - | - | |
Cone5ag0040 | 666 | SUPERFAMILY | Actin-like ATPase domain | 38 | 221 | IPR043129 | - | |
Cone5ag0040 | 666 | SUPERFAMILY | Heat shock protein 70kD (HSP70), peptide-binding domain | 419 | 576 | IPR029047 | - | |
Cone5ag0040 | 666 | Gene3D | Actin; Chain A, domain 4 | 262 | 345 | - | - | |
Cone5ag0040 | 666 | Gene3D | - | 222 | 396 | - | - | |
Cone5ag0040 | 666 | FunFam | Heat shock protein ssb1 | 102 | 156 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone12ag0594 | Cone-Chr12:5240009 | Cone5ag0040 | Cone-Chr5:217216 | 0 | dispersed | |
Cone5ag0040 | Cone-Chr5:217216 | Cone8ag0609 | Cone-Chr8:5761574 | 0 | dispersed | |
Cone1ag1748 | Cone-Chr1:58193194 | Cone5ag0040 | Cone-Chr5:217216 | 6.29E-247 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0040 | K09490 | - | mdm:103450916 | 1088.56 |