Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0058 | ATGGCGAATTTTGTCAAACCTGAGAATGCTCTGAAACGAGCTGAAGAGTTAATCAATATCGGACAGAAGCAAGATGCCCTGCAAGCGCTTCATGATCTTATTACCTCAAAGAAATACCGAGCATGGCAAAAGCCACTTGAAAAGATCATGTTTAAATATGTAGAGCTTTGCGTGGACATGAGGAGAGGAAGGTTTGCCAAGGATGGTTTGATTCAATATCGAATTGTCTGCCAGCAAGTCAATGTCTCTTCTCTGGAGGAGGTGATCAAGCATTTTATGCATCTCTCCACTGAGAAAGCTGAGCAGGCACGTAGTCAGGCACAGGCCCTGGAAGAGGCTCTAGATGTTGATGACTTGGAAGCAGATCAAAGGCCAGAAGATCTAATGCTTTCTTATGTTAGTGGAGAGAAGGGAAAGGATCGGTCCGATCGTGAACTTGTCACCCCTTGGTTCAAGTTTCTATGGGAGACATACAGAACAGTGCTTGAAATATTACGTAACAATTCAAAATTGGAGGCACTTTATGCGATGACTGCTCATCGGGCCTTCCAGTTCTGCAAGCAGTACAAAAGAACAACAGAATTTCGGAGGTTATGTGAAATTATCAGAAATCACCTTTCAAATCTTAATAAATATAGGGATCAAAGAGATAGGCCTGACCTATCAGCCCCAGAGAGTTTGCAACTATATCTTGACACAAGATGTGAACAACTAAAGATTGCTACAGAACTTGAACTCTGGCAGGAAGCTTTCCGCTCAGTTGAAGATATTCATGGATTGATGTGCTTGGTTAAAAAAACGCCCAAGGCATCCTTGATGGTGGTTTATTATGCCAAGTTAACTGAAATTTTCTGGATTTCAGCTAGCCATCTTTATCATGCATATGCATGGCTCAAGCTGTTCTCTCTACAGAAAAGCTTCAATAAGAATTTAAGCCAAAAGGATTTGCAATTAATAGCATCATCTGTTGTTTTAGCTGCTCTATCAGTGCCTCCCTATGACCATAAACACGGTGCATCACATTTGGAACTTGAAAACGAAAAAGAGCGCAACTCGAGAATGGAAAATCTTATAGGATTCAATCTTGACCCTAAACTTGACAATAGAGAAGTGTTTTCGCGATCAAACCTTCTCTCTGAACTGGTTTCAAAAGGAGTGCTTAGCTGTGCAACCCAGGAAGTAAAAGATATATACCATCTTATCGAGCATGAATTCTTGCCTCTTGATCTCACTTCAAAGCTGCAGCCTTCATTGAACAAAATCTCAAAGCTTGGGGGGAAGGTGGCATCAGCCTCATCTCTACCAGAAGTGCAACTTTCCCAGTATATTCCTGCCCTGGAAAAGCTTGGAACCCTGAGGTTGCTTCAGCAGGTGTCTCGGGTTTACCAGACAATGAAAATTGAGAGTTTATCCAAGATGCTCCCATTTTTTGATTTTCCCATTGTGGAAAAGATCTCTGTGGATGCTGTGAAGCAGAATTTCATAGCCATGAAAGTTGACCACATGAAGGGCGTTGTGTTATTTGGAAATTTAGGTGTTGAATCTGATGATTTACGGGATCACCTAACCGTTCTTGCTGCATCATTAAATAAAGCAAGGTCGATGATCTATCCTTCAGTACCGAAAGCATCAAAGATAGGTGGGCTGTTGCCTGGTTTAGCAGATACTGTGGATAAAGAACACAAGAGACTTCTTGCTCGAAAATCGATTATAGAGAAAAGGAAGGAGGAACAGGAGCGCCAACTCTTGGAAATGGAACGTGAGGAGGAATCAAGAAGACTACGATTACAGAAGATAACTGAAGAGGCAGAGCAAAAGAGACTTGCATCTGAGTATGAGCAAAGGAAAAATCAAAGGATTCTGAGAGAAATAGAAGAGCGGGAACTTGAAGAAGCACAAGCTTTGCTCCAGGCGCGTGGCACTAAAAAGAAGGGAAAGAAGCCAATCCTAGAAGGCGAAAAGATGACAAAGCAAACTTTGATGAAACTGGCACTTGATGAGCAGCTAAGAGAGAGGCAAGACATGGAGAAGAAATTACAAAAACTAGCTAAAACCATGGATTATCTAGAGAGAGCAAAAAGAGAAGAATCAGCACCCTTAATTGAAGCTGCATTTCAACAACGTATAGTTGAAGAGAGAGTACTACATGAACGGGAGCAACAGCTTGAGGTTGAGCTAAGCAAGCAGCGCCATGAAGGAGACCTCAAGGAGAAGATTCGCCTGTCCCGAATGATTGAGAATAAGATGATATTCCAGGAGAGAGTGATGAGCCGTCGTCAAGAAGAGTTTGACCGATGTAGAGCAGAGAGAAAGGAGCAGGTTAAGCAAATGATTCAGGCTAGGAGACTGGATAGGGAGATTAAGAGGAAGAAGGTATACTATGTGAGAACTGAAGAAGAAAAACTTAGAATCGTGCAAGAAGCGGAGGAAGCTCACAAGCGTGAAGAGGCTGAGAAACGTAGAAAGGAGGAGGCCGAACGCAAGGCTAAATTGGATGAGATTGCTGAAAAGCAGAGGCAGAGAGAACGGGAACTAGAAGAAAAAGAAAGGCTCAGAAAAGAAGCTTTGTTGGGGAGACCCGCTGAGGTGCCTTCTAGACTTTCTGAGACTATTCATCCTCGCTCTTCAGAGCCCATAGCTGCTACTCCTGCTGCTGCTTCTGCCGGTCCCACCTCTACCCCATCTGCTGGAAAATACGTGCCTAGGCACCTTCGTGAGAAGGCTGCCCAGCCACCACCACCTGTTGAATCTGACCGGTGGGGCAGTAGGCTGGATAGATGGCGATAG | 2787 | 43.6 | MANFVKPENALKRAEELINIGQKQDALQALHDLITSKKYRAWQKPLEKIMFKYVELCVDMRRGRFAKDGLIQYRIVCQQVNVSSLEEVIKHFMHLSTEKAEQARSQAQALEEALDVDDLEADQRPEDLMLSYVSGEKGKDRSDRELVTPWFKFLWETYRTVLEILRNNSKLEALYAMTAHRAFQFCKQYKRTTEFRRLCEIIRNHLSNLNKYRDQRDRPDLSAPESLQLYLDTRCEQLKIATELELWQEAFRSVEDIHGLMCLVKKTPKASLMVVYYAKLTEIFWISASHLYHAYAWLKLFSLQKSFNKNLSQKDLQLIASSVVLAALSVPPYDHKHGASHLELENEKERNSRMENLIGFNLDPKLDNREVFSRSNLLSELVSKGVLSCATQEVKDIYHLIEHEFLPLDLTSKLQPSLNKISKLGGKVASASSLPEVQLSQYIPALEKLGTLRLLQQVSRVYQTMKIESLSKMLPFFDFPIVEKISVDAVKQNFIAMKVDHMKGVVLFGNLGVESDDLRDHLTVLAASLNKARSMIYPSVPKASKIGGLLPGLADTVDKEHKRLLARKSIIEKRKEEQERQLLEMEREEESRRLRLQKITEEAEQKRLASEYEQRKNQRILREIEERELEEAQALLQARGTKKKGKKPILEGEKMTKQTLMKLALDEQLRERQDMEKKLQKLAKTMDYLERAKREESAPLIEAAFQQRIVEERVLHEREQQLEVELSKQRHEGDLKEKIRLSRMIENKMIFQERVMSRRQEEFDRCRAERKEQVKQMIQARRLDREIKRKKVYYVRTEEEKLRIVQEAEEAHKREEAEKRRKEEAERKAKLDEIAEKQRQRERELEEKERLRKEALLGRPAEVPSRLSETIHPRSSEPIAATPAAASAGPTSTPSAGKYVPRHLREKAAQPPPPVESDRWGSRLDRWR | 928 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 296555 | 301941 | + | Conep05aG0005800.1 | Cone5ag0058 | 437076 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0058 | 928 | Hamap | Eukaryotic translation initiation factor 3 subunit A [EIF3A]. | 1 | 901 | IPR027512 | GO:0005852(InterPro) | |
Cone5ag0058 | 928 | Coils | Coil | 93 | 120 | - | - | |
Cone5ag0058 | 928 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 217 | 268 | - | - | |
Cone5ag0058 | 928 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 268 | 342 | - | - | |
Cone5ag0058 | 928 | MobiDBLite | consensus disorder prediction | 809 | 928 | - | - | |
Cone5ag0058 | 928 | MobiDBLite | consensus disorder prediction | 809 | 859 | - | - | |
Cone5ag0058 | 928 | SMART | motif in proteasome subunits, Int-6, Nip-1 and TRIP-15 | 441 | 532 | IPR000717 | - | |
Cone5ag0058 | 928 | ProSiteProfiles | PCI domain profile. | 316 | 513 | IPR000717 | - | |
Cone5ag0058 | 928 | Pfam | eIF3a, PCI domain, TPR-like region | 8 | 407 | IPR054711 | - | |
Cone5ag0058 | 928 | Coils | Coil | 615 | 635 | - | - | |
Cone5ag0058 | 928 | Coils | Coil | 561 | 595 | - | - | |
Cone5ag0058 | 928 | Coils | Coil | 795 | 854 | - | - | |
Cone5ag0058 | 928 | FunFam | Eukaryotic translation initiation factor 3 subunit A | 352 | 494 | - | - | |
Cone5ag0058 | 928 | Pfam | PCI domain | 437 | 508 | IPR000717 | - | |
Cone5ag0058 | 928 | Gene3D | - | 364 | 494 | - | - | |
Cone5ag0058 | 928 | Gene3D | - | 268 | 343 | - | - | |
Cone5ag0058 | 928 | Gene3D | UVR domain | 217 | 267 | - | - | |
Cone5ag0058 | 928 | Coils | Coil | 665 | 695 | - | - | |
Cone5ag0058 | 928 | PANTHER | EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT | 1 | 900 | IPR027512 | GO:0001732(PANTHER)|GO:0002188(PANTHER)|GO:0003729(PANTHER)|GO:0003743(PANTHER)|GO:0005852(InterPro)|GO:0043614(PANTHER)|GO:0071540(PANTHER)|GO:0071541(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1535 | Cone-Chr1:57325335 | Cone5ag0058 | Cone-Chr5:296555 | 0 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0058 | K03254 | - | vvi:100244162 | 1357.43 |