Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0075 ATGTGCTGTCATGAACTCCTTTTGGTGCAGAAAGTGTTTGAGTTATACGAGAAAATCTCAAGCCTTGACAGCCTCAAGCCCTCGCAAGATGTCGACATGCTCTTCACACAGCTTGTTCTCACTTGCATCCCAATACAGCCTGTAGATGTTACCAATTTGTGCAATAGCGTTCAAGAAATGAGGTCAAAACTCATCAGGCTATGTGGAGAAGCTGAAGGACTGTTAGAAACCCATTTCTCCACCATCTTAGCCTCCTACGAAGACCCACTTGCTCATTTGAACGTTTTCCCCTACTATTCCAATTACCTCAAACTAAGCCTCCTTGAATTCAACATTCTTAAGCAGCACTGCACTCAAAACCCTAGCAAAATTGCCTTTGTGGGTTCTGGCCCTCTCCCTTTGACCTCAATCGTTTTGGCCTCTAAACACCTTACATCAACGCGTTTCCATAATTATGATATCGACCCGTTGGCCAATTCTAAGGCTTCTCAATTGATCTCATCCGATCCTGACCTGTCGGAAAGAATGGTGTTTCATACTAGAGATGTAATGGATGTTACAACTGAATTGAAAGACTATGAAGTGGTCTTCTTGGCAGCTTTAGTAGGGATTGATGAGGAAGAGAAGGTTAGAGTGATTGAGCATTTAGGGAAGTACATGGCTCCTGGATCGATTTTGATGCTAAGGAGTGCTCGTGGGGCAAGGGCTTTTCTTTATCCGGTGGTCGATGCTATGGATTTACGAGGTTTTGAGGTTCTTTCTGTGTTTCATCCAACGGATGAAGTTATTAATTCGGTCGTTATCGCACGCACTTGCTCGTCTTTTGATTTCGATTTACTCGTATGA 846 43.5 MCCHELLLVQKVFELYEKISSLDSLKPSQDVDMLFTQLVLTCIPIQPVDVTNLCNSVQEMRSKLIRLCGEAEGLLETHFSTILASYEDPLAHLNVFPYYSNYLKLSLLEFNILKQHCTQNPSKIAFVGSGPLPLTSIVLASKHLTSTRFHNYDIDPLANSKASQLISSDPDLSERMVFHTRDVMDVTTELKDYEVVFLAALVGIDEEEKVRVIEHLGKYMAPGSILMLRSARGARAFLYPVVDAMDLRGFEVLSVFHPTDEVINSVVIARTCSSFDFDLLV 281
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 361880 362725 + Conep05aG0007500.1 Cone5ag0075 437093
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0075 281 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 276 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone5ag0075 281 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 111 229 IPR029063 -
Cone5ag0075 281 PANTHER NICOTIANAMINE SYNTHASE 3 6 271 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone5ag0075 281 Pfam Nicotianamine synthase protein 7 271 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone5ag0075 281 Gene3D Vaccinia Virus protein VP39 2 273 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0075 Cone-Chr5:361880 Cone5ag0076 Cone-Chr5:365771 5.93E-138 tandem
Cone1ag1552 Cone-Chr1:57389062 Cone5ag0075 Cone-Chr5:361880 2.66E-80 wgd
Cone10ag0819 Cone-Chr10:4161491 Cone5ag0075 Cone-Chr5:361880 8.63E-132 wgd
Cone3ag0845 Cone-Chr3:4328238 Cone5ag0075 Cone-Chr5:361880 8.66E-133 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0075 K05953 - vvi:100254544 423.705