Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0075 | ATGTGCTGTCATGAACTCCTTTTGGTGCAGAAAGTGTTTGAGTTATACGAGAAAATCTCAAGCCTTGACAGCCTCAAGCCCTCGCAAGATGTCGACATGCTCTTCACACAGCTTGTTCTCACTTGCATCCCAATACAGCCTGTAGATGTTACCAATTTGTGCAATAGCGTTCAAGAAATGAGGTCAAAACTCATCAGGCTATGTGGAGAAGCTGAAGGACTGTTAGAAACCCATTTCTCCACCATCTTAGCCTCCTACGAAGACCCACTTGCTCATTTGAACGTTTTCCCCTACTATTCCAATTACCTCAAACTAAGCCTCCTTGAATTCAACATTCTTAAGCAGCACTGCACTCAAAACCCTAGCAAAATTGCCTTTGTGGGTTCTGGCCCTCTCCCTTTGACCTCAATCGTTTTGGCCTCTAAACACCTTACATCAACGCGTTTCCATAATTATGATATCGACCCGTTGGCCAATTCTAAGGCTTCTCAATTGATCTCATCCGATCCTGACCTGTCGGAAAGAATGGTGTTTCATACTAGAGATGTAATGGATGTTACAACTGAATTGAAAGACTATGAAGTGGTCTTCTTGGCAGCTTTAGTAGGGATTGATGAGGAAGAGAAGGTTAGAGTGATTGAGCATTTAGGGAAGTACATGGCTCCTGGATCGATTTTGATGCTAAGGAGTGCTCGTGGGGCAAGGGCTTTTCTTTATCCGGTGGTCGATGCTATGGATTTACGAGGTTTTGAGGTTCTTTCTGTGTTTCATCCAACGGATGAAGTTATTAATTCGGTCGTTATCGCACGCACTTGCTCGTCTTTTGATTTCGATTTACTCGTATGA | 846 | 43.5 | MCCHELLLVQKVFELYEKISSLDSLKPSQDVDMLFTQLVLTCIPIQPVDVTNLCNSVQEMRSKLIRLCGEAEGLLETHFSTILASYEDPLAHLNVFPYYSNYLKLSLLEFNILKQHCTQNPSKIAFVGSGPLPLTSIVLASKHLTSTRFHNYDIDPLANSKASQLISSDPDLSERMVFHTRDVMDVTTELKDYEVVFLAALVGIDEEEKVRVIEHLGKYMAPGSILMLRSARGARAFLYPVVDAMDLRGFEVLSVFHPTDEVINSVVIARTCSSFDFDLLV | 281 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 361880 | 362725 | + | Conep05aG0007500.1 | Cone5ag0075 | 437093 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0075 | 281 | ProSiteProfiles | Nicotianamine synthase (NAS)-like family profile. | 1 | 276 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cone5ag0075 | 281 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 111 | 229 | IPR029063 | - | |
Cone5ag0075 | 281 | PANTHER | NICOTIANAMINE SYNTHASE 3 | 6 | 271 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cone5ag0075 | 281 | Pfam | Nicotianamine synthase protein | 7 | 271 | IPR004298 | GO:0030410(InterPro)|GO:0030418(InterPro) | |
Cone5ag0075 | 281 | Gene3D | Vaccinia Virus protein VP39 | 2 | 273 | IPR029063 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag0075 | Cone-Chr5:361880 | Cone5ag0076 | Cone-Chr5:365771 | 5.93E-138 | tandem | |
Cone1ag1552 | Cone-Chr1:57389062 | Cone5ag0075 | Cone-Chr5:361880 | 2.66E-80 | wgd | |
Cone10ag0819 | Cone-Chr10:4161491 | Cone5ag0075 | Cone-Chr5:361880 | 8.63E-132 | wgd | |
Cone3ag0845 | Cone-Chr3:4328238 | Cone5ag0075 | Cone-Chr5:361880 | 8.66E-133 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0075 | K05953 | - | vvi:100254544 | 423.705 |