Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0076 ATGGGTTGTCAAGAAGAGACTCTGGTCCAAAAAGTGCAAGAATTGTACGACCAAATCTCTAACCTAGAGAGCCTAAAGCCATGCAAACAGGTCGACATGCTCTTCACCCAACTCGTTCTTACATGCATGTCCCCTACCCCTTCAATTGATGTCACAAAACTCTGCCAAGACGTGCAAGAAATGAGATCAAAGATGATCAGGCTATGTGGACAAGCAGAGGGGCTCTTAGAGGCTCATTTCTCCACTCTCTTATCCTCATACCAAAACCCACTTGACCATCTCCATCTCTTCCCTTACTATTCCAATTACCTAAAGCTCACCCAACTTGAGTTCAACATTCTTACCAATCACAGCAGTTCGTTCATTAACAAAATTGCCTTTGTGGGTTCAGGTCCACTTCCTCTTACCTCAATTGTTTTGGCCTCAAACCACCTTAAGTCAACCACTATTCACAACTATGACATTGACCCATTAGCCAATTCCAAGGCTCTTGACTTGATCTCATCTCATCCTGACTTGTCAAGGAGAATGTTCTTTCATACCACTGATGTAATGAATGTGACGCATGCTTTGAAAGAGTATGATGTTGTGTTTTTAGCAGCTTTAGTGGGTATGGATAAGGAAGACAAAGTTAGAGTTATTGAGCATTTAGCAAAGTTCATGGCTCCAGGGGCTTATCTGATGTTGAGGAGTGCGCATGGAGCAAGGGCTTTTCTCTATCCAGTGGTTGATTCTTGTGATTTAAGAGGGTTTGAGACTCTTTCCGTGTTTCATCCAACGGATGATGTTATAAATTCCGTTGTTCTTGCACGAAAACTTCCGGTTGCTGTAAACTCAGTCCATTATCATCATCTGCTGTTAATGCCTTGTAATCTATGTGTTGGTATTGAGGCTTTCAATCATCTTCATCTGAATCATGGGAATATGATTGAGGAAATTGCCATGGAGGAGAAGCTTTGA 960 42.08 MGCQEETLVQKVQELYDQISNLESLKPCKQVDMLFTQLVLTCMSPTPSIDVTKLCQDVQEMRSKMIRLCGQAEGLLEAHFSTLLSSYQNPLDHLHLFPYYSNYLKLTQLEFNILTNHSSSFINKIAFVGSGPLPLTSIVLASNHLKSTTIHNYDIDPLANSKALDLISSHPDLSRRMFFHTTDVMNVTHALKEYDVVFLAALVGMDKEDKVRVIEHLAKFMAPGAYLMLRSAHGARAFLYPVVDSCDLRGFETLSVFHPTDDVINSVVLARKLPVAVNSVHYHHLLLMPCNLCVGIEAFNHLHLNHGNMIEEIAMEEKL 319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 365771 366730 + Conep05aG0007600.1 Cone5ag0076 437094
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0076 319 Gene3D Vaccinia Virus protein VP39 4 274 IPR029063 -
Cone5ag0076 319 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 1 277 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone5ag0076 319 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 138 307 IPR029063 -
Cone5ag0076 319 Coils Coil 5 25 - -
Cone5ag0076 319 PANTHER NICOTIANAMINE SYNTHASE 3 5 293 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
Cone5ag0076 319 Pfam Nicotianamine synthase protein 5 275 IPR004298 GO:0030410(InterPro)|GO:0030418(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone10ag0819 Cone-Chr10:4161491 Cone5ag0076 Cone-Chr5:365771 1.07E-141 dispersed
Cone1ag1552 Cone-Chr1:57389062 Cone5ag0076 Cone-Chr5:365771 6.46E-131 dispersed
Cone3ag0845 Cone-Chr3:4328238 Cone5ag0076 Cone-Chr5:365771 1.77E-141 dispersed
Cone5ag0075 Cone-Chr5:361880 Cone5ag0076 Cone-Chr5:365771 5.93E-138 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0076 K05953 - rcu:8269821 449.129