Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0098 ATGGCAACAGATCTTAATGCCGAATTATCAAAGAAAACTGGAGTTTTGGGTCTTAAGGTATGGGAAGTGATTGGAATTGCTGTTGGGATATTCATAGTGGTTATCCTTTCCATCCTGTCATTATGTCTTACTTCAAGAAATAAATCAAAGCAAGCTAGGAGGGCTACTATGCTTTCCCGGAGTCAGATCCCAACAGTTTCCAAGGAAATCAAAGAAGTTAGAATCGAGCAATTATCAACAGACGAATTTGTCCCTCGTGACGGAATTCTTCTCACCATTCATGATAAATCCAGTGACAAAGATTCGGACAAGGTTCTGGTCCACCTAGGAATTGGTAATGCAAAAAATGGAGACAGTGGAACAAACCAGTCCGGGTCATTTCGTAATTTGGATAAAGATGGAGGGTATCATTCTGGAGAAGAAGGGAGTTCCGGGACTGTGACTGTGTATAAACCGGCTTCACATCCGATAACTGCTCCATCCCCCTTATCGGGCCTGCCCGAGTTTTCTCACTTGGGCTGGGGTCATTGGTTTACTCTAAGGGATCTTGAGATTGCAACTAACCGCTTTTCGAAAGAGAATATTATTGGGGAAGGTGGTTATGGAGTTGTTTATCAGGGACGCTTGATTAATGAAACTCCAGTTGCTGTTAAAAAGCTTCTCAATAATCTGGGCCAAGCTGAGAAAGAATTTAGAGTAGAAGTCGATGCTATTGGTCATGTCCGTCATAAAAATTTGGTTCGCCTTCTGGGATATTGCATTGAAGGGATTCATAGGATGTTGGTCTATGAGTTTGTGAACAATGGAAACTTAGAGCAATGGCTCCATGGCGCAATGCAGCAACATGGATATCTCACTTGGGAGGCCAGGATGAAGGTTCTTCTCGGCACAGCAAAAGCTCTTGCTTACTTGCATGAAGCAATCGAACCTAAAGTGGTGCACCGTGACATTAAATCCAGCAATATATTGATCGATGAAGACTTCAATGCGAAGGTCTCTGACTTTGGTTTGGCAAAGTTGCTTGGTGCTGGAACTAGTCATGTCACAACTCGAGTCATGGGAACCTTTGGATATGTGGCTCCTGAATATGCAAATACTGGACTTCTGAATGAGAAGAGTGATGTCTATAGCTTTGGCGTTTTGCTCTTAGAGGCAATTACTGGACGAGATCCTGTTGACTATGGCCGTCCAGCCCAAGAGGTAAATCTGGTAGACTGGCTGAAAATGATGGTTGGAAGTAGGCGGTCGGAAGAAGTTGTGGACCCAAATATGGAAGTGAGGCCATCTACTAGAGCCTTAAAACGAGCTCTTTTGACTGCTCTGCGGTGCGTTGACCCAGATTCTGGAAAGAGACCAAGGATGAGCCAAGTTGTCCGAATGCTCGAGTCTGAAGAATACCCAGTACAACGCGAGGATCGAAGGCACAGAAGAGCCCAGGGAGGAGGTAGCATTTCTGATACGGATCTAAGTGAAAATCCTGGTTCGAGATCGGAAAGCAGACGTGACCATCGGGTTTGA 1518 44.66 MATDLNAELSKKTGVLGLKVWEVIGIAVGIFIVVILSILSLCLTSRNKSKQARRATMLSRSQIPTVSKEIKEVRIEQLSTDEFVPRDGILLTIHDKSSDKDSDKVLVHLGIGNAKNGDSGTNQSGSFRNLDKDGGYHSGEEGSSGTVTVYKPASHPITAPSPLSGLPEFSHLGWGHWFTLRDLEIATNRFSKENIIGEGGYGVVYQGRLINETPVAVKKLLNNLGQAEKEFRVEVDAIGHVRHKNLVRLLGYCIEGIHRMLVYEFVNNGNLEQWLHGAMQQHGYLTWEARMKVLLGTAKALAYLHEAIEPKVVHRDIKSSNILIDEDFNAKVSDFGLAKLLGAGTSHVTTRVMGTFGYVAPEYANTGLLNEKSDVYSFGVLLLEAITGRDPVDYGRPAQEVNLVDWLKMMVGSRRSEEVVDPNMEVRPSTRALKRALLTALRCVDPDSGKRPRMSQVVRMLESEEYPVQREDRRHRRAQGGGSISDTDLSENPGSRSESRRDHRV 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 454772 457815 - Conep05aG0009900.1 Cone5ag0098 437116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0098 505 ProSiteProfiles Protein kinase domain profile. 190 454 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0098 505 SMART serkin_6 190 461 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0098 505 MobiDBLite consensus disorder prediction 464 481 - -
Cone5ag0098 505 Gene3D Phosphorylase Kinase; domain 1 172 265 - -
Cone5ag0098 505 MobiDBLite consensus disorder prediction 117 153 - -
Cone5ag0098 505 FunFam Putative receptor-like serine/threonine-protein kinase 266 477 - -
Cone5ag0098 505 CDD STKc_IRAK 196 462 - -
Cone5ag0098 505 FunFam Putative receptor-like protein kinase 172 265 - -
Cone5ag0098 505 SUPERFAMILY Protein kinase-like (PK-like) 174 466 IPR011009 -
Cone5ag0098 505 ProSitePatterns Protein kinases ATP-binding region signature. 196 219 IPR017441 GO:0005524(InterPro)
Cone5ag0098 505 Pfam Protein kinase domain 191 459 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0098 505 ProSitePatterns Serine/Threonine protein kinases active-site signature. 312 324 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag0098 505 PANTHER OS01G0323000 PROTEIN 1 478 IPR052232 -
Cone5ag0098 505 MobiDBLite consensus disorder prediction 462 505 - -
Cone5ag0098 505 Gene3D Transferase(Phosphotransferase) domain 1 266 479 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag1487 Cone-Chr3:33526021 Cone5ag0098 Cone-Chr5:454772 3.67E-228 dispersed
Cone5ag0098 Cone-Chr5:454772 Cone7ag1363 Cone-Chr7:9883587 5.06E-167 dispersed
Cone1ag1578 Cone-Chr1:57478311 Cone5ag0098 Cone-Chr5:454772 0 wgd
Cone10ag0838 Cone-Chr10:4250465 Cone5ag0098 Cone-Chr5:454772 2.95E-257 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82815 PF05832 DUF846 5.80E-46 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0098 - - - 0.0