Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0108 ATGAGGAAGCTTTTGTGGGTCGGATTTGTAATAGAGCTAGTTTTTAGCAAATGGGTTGCTGGGTTTATGCTGGATAATGTAACAGAGCTGTCTTTATCAGATGCTTATGGAGTTTCCGCAGCTACTTACAATCCATTAATGGTGGGACTTACTCTCATTCACAGTGCTGCTGCTAAAGGAGCCGTGTGCTTGGACGGATCATTACCTGGGTATCATCTCCATCGTGGATATGGGTCAGGAGCAAATAGCTGGCTCATTCATTTGGAGGGTGGTGGATGGTGTAATACTATTAGAAATTGTGTATACCGGAAAAAAACACGCAGGGGGTCATCATATTTTATGGAAAAGCAGATACCATTTATAGGAATTTTGAGTAATAGTGCTGCTGAAAATCCTGATTTTTTCAACTGGAACAGAGCAAAGGTTCGATACTGTGACGGTGCTTCTTTCACTGGGGACAGTGAAGATAAGGTTGCACAATTGCAATTTAGAGGACAGCGAATATGGTCGGCTGCAATGGCAGACTTGATGTCAACGGGAATGCGTTCTGCCAAGCAGGCTCTTCTGTCTGGCTGCTCTGCTGGGGGTCTGGCCGCAATTTTACACTGTGACGAGTTCCGAGGCTTATTTCCCAGAACTACCAAAGTCAAGTGCCTCAGTGATGCTGGCTTATTTCTTGATGCGGCTGACATATCTGGAGGGCGCTCTTTAAGGAACCTGTTTGGTGGTGTGGTTGGATTGCAGGGAGTGCAAAAGAATCTGCCAAGCTCCTGTACAAATCATCTCGACCCAACTTCGTGCTTCTTCCCTCAAAACTCGATTGCGAACATTAGAACCCCACTGTTCCTTCTAAATGCAGCCTATGATTCATGGCAGATCCCATCTAGTTTAGCCCCGCCTTCTGTGGATCCTGCTGGATTTTGGCACGATTGCAGATTAAACCATGGAAAATGTTCTGAAGCACAGCTTCAATTTCTACAAGGGTTTAGAAATCAAATGTTAAATGCTGTAAGGGGCTTCTCCGGATCTAGAGCTAACGGGATATTTATAAATTCATGTTTTGCTCACTGCCAAACTGAGAGGCAAGATACATGGTTTGCGGATGATTCACCCACAATTGGGAACAAGGCGATAGCCATAGCGGTTGGAGATTGGTACTTTGACCGAGCAGGCATCAAGTCCATAGACTGTCCCTACCCTTGTGACAATACTTGTCACCATCTTGTCTTCAGAAGCTAA 1239 45.12 MRKLLWVGFVIELVFSKWVAGFMLDNVTELSLSDAYGVSAATYNPLMVGLTLIHSAAAKGAVCLDGSLPGYHLHRGYGSGANSWLIHLEGGGWCNTIRNCVYRKKTRRGSSYFMEKQIPFIGILSNSAAENPDFFNWNRAKVRYCDGASFTGDSEDKVAQLQFRGQRIWSAAMADLMSTGMRSAKQALLSGCSAGGLAAILHCDEFRGLFPRTTKVKCLSDAGLFLDAADISGGRSLRNLFGGVVGLQGVQKNLPSSCTNHLDPTSCFFPQNSIANIRTPLFLLNAAYDSWQIPSSLAPPSVDPAGFWHDCRLNHGKCSEAQLQFLQGFRNQMLNAVRGFSGSRANGIFINSCFAHCQTERQDTWFADDSPTIGNKAIAIAVGDWYFDRAGIKSIDCPYPCDNTCHHLVFRS 412
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 497092 500972 - Conep05aG0010900.1 Cone5ag0108 437126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0108 412 Pfam Pectinacetylesterase 44 390 IPR004963 GO:0016787(InterPro)
Cone5ag0108 412 PANTHER NOTUM-RELATED 33 407 IPR004963 GO:0009505(PANTHER)|GO:0016787(InterPro)|GO:0052793(PANTHER)|GO:0071555(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone19ag0602 Cone-Chr19:5311186 Cone5ag0108 Cone-Chr5:497092 2.72E-220 dispersed
Cone1ag1161 Cone-Chr1:55733883 Cone5ag0108 Cone-Chr5:497092 4.07E-153 dispersed
Cone3ag0338 Cone-Chr3:1713273 Cone5ag0108 Cone-Chr5:497092 1.82E-149 dispersed
Cone5ag0108 Cone-Chr5:497092 Cone6ag0879 Cone-Chr6:4484632 9.68E-121 dispersed
Cone1ag1586 Cone-Chr1:57518332 Cone5ag0108 Cone-Chr5:497092 2.85E-301 wgd
Cone10ag0844 Cone-Chr10:4294637 Cone5ag0108 Cone-Chr5:497092 1.70E-212 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0108 K19882 - csv:101218273 684.871