Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0138 ATGCAAACATTAAAAAAAGACCATCTTTTACTGATTAGGGTTTCAATTAGACCCCCAAAGATGTCGTCGCAAGACATAAACGGGCTCAACAATCCGCTGGTGTTCCAAGACGAAACCTTGCGGTTCAATTGCGGTCCGCCTCAGCGGCGAGTCGGCAACTCGGATACGAAAACCCGTGAGCTCAGTGGTTTCATGGACGAGAAGCTCTTCGCTGTGGACCGCGACCGTTTCTTCACCTCTCCAGGAACGGACTTCCGACGGAATGTTTTTGGTGAAGGGCCGGACCGTTCGGAGAGCAGGAATTGGAATGGAAATGGGAGTAATTCCACACCTAGAGGTAAAGGATCAGAGGAAGACGAAGAAGATGAAGATGAAGACGAGGAAGAGGACGATGATGATGACGAAGATGAAGTTGATGATGAAGGCGAAGGTGATGTCGAGAGACTTGTTGCCGTTGATGAACAAAACAAGAGCAGCCATGACGGAAATAATCATAATGGTGGCAGTGTACAAAGTGGAGGAGCTAACAAAATTGGAAATGGGAAAGCAAAGCACCGTTCTTCTTTTGGCGGGATAGTGATGGTTGGATCCAACAGAGAGGTTCTATTGAAGGAAGGTATGGTTGGGCTGTCTGGCAACCACACGAGGACAAGCCCGAGTTCTGGCCCAACCGAGAGCAATCAGCAAAGAAGACTAGGAGGGAGTTTCTCCAATGCAGTTACGATTGCGGAAAATGATGGGGACGTATACTATTCACAGTATTTGCGGAACAATGAGGGGTCTGCTTGTGGGCAAAAGGAATTAGTTGTGGAAAATGGATGTGGCTTCAGTGGGAGGAGGGATGTTTCTTATTCCTGTGAATCCGGCGAGTCTTTGAGAGCAATTCTCTCTGATCCTGTAACGGGTGCTCTCATGGATGATGCAGTGATATTACCTTGCGGGCACTCCTTTGGAAGTGGCGGAATACAACATGTTCTTAGAACGAAAGCGTGCTTCACCTGTTATCAATCAATTTCAGGAGATTCTATTGCTCTAAATCTCTCTCTACGAGCTGCAGTCCAGGCCTTCCGCCGGGAGGAAGAATTACAATTTTACCGCTCACCCAAAAGGAGAAAGGAGAGATTTGACCAGGACAAAGGTGGTTTTGGTGATTCAACTCTCATGGATGCTAGAGGGAGAGGCGTTCAGTTTCCATTTGCCGTCACAGACCGGGTTATTATAAAGGGGAACAAGAGAACACCACAGCGCTTTGTGGGGCGAGAGGCTGTTGTAACAACACAATGCTTAAATGGATGGTATGTGGTGAAGACAGTTGACAATGCAGAGAGTGTAAAATTGCAGTATCGTTCACTTTCCAAGGTTCCAAATGATCCATCTTCAAAGCCCATGTCAAAAATGACAGCACCAAATTGGCTCTAG 1419 47.15 MQTLKKDHLLLIRVSIRPPKMSSQDINGLNNPLVFQDETLRFNCGPPQRRVGNSDTKTRELSGFMDEKLFAVDRDRFFTSPGTDFRRNVFGEGPDRSESRNWNGNGSNSTPRGKGSEEDEEDEDEDEEEDDDDDEDEVDDEGEGDVERLVAVDEQNKSSHDGNNHNGGSVQSGGANKIGNGKAKHRSSFGGIVMVGSNREVLLKEGMVGLSGNHTRTSPSSGPTESNQQRRLGGSFSNAVTIAENDGDVYYSQYLRNNEGSACGQKELVVENGCGFSGRRDVSYSCESGESLRAILSDPVTGALMDDAVILPCGHSFGSGGIQHVLRTKACFTCYQSISGDSIALNLSLRAAVQAFRREEELQFYRSPKRRKERFDQDKGGFGDSTLMDARGRGVQFPFAVTDRVIIKGNKRTPQRFVGREAVVTTQCLNGWYVVKTVDNAESVKLQYRSLSKVPNDPSSKPMSKMTAPNWL 472
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 598063 600961 + Conep05aG0014100.1 Cone5ag0138 437156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0138 472 SUPERFAMILY RING/U-box 292 360 - -
Cone5ag0138 472 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 62-RELATED 32 464 - -
Cone5ag0138 472 MobiDBLite consensus disorder prediction 451 472 - -
Cone5ag0138 472 MobiDBLite consensus disorder prediction 81 186 - -
Cone5ag0138 472 MobiDBLite consensus disorder prediction 117 147 - -
Cone5ag0138 472 MobiDBLite consensus disorder prediction 211 232 - -
Cone5ag0138 472 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 291 363 IPR013083 -
Cone5ag0138 472 ProSiteProfiles U-box domain profile. 291 363 IPR003613 GO:0004842(InterPro)|GO:0016567(InterPro)
Cone5ag0138 472 MobiDBLite consensus disorder prediction 210 232 - -
Cone5ag0138 472 MobiDBLite consensus disorder prediction 98 112 - -
Cone5ag0138 472 MobiDBLite consensus disorder prediction 161 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1616 Cone-Chr1:57628751 Cone5ag0138 Cone-Chr5:598063 1.44E-262 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0138 - - - 0.0