Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0141 | ATGGCCAGAAGAAAGAGCGAACGGAGAAGAGAAGAAGGTCGAAGCATGGAAATGAAAGATCCGTCGAACTCAAATCCGAGCTCTCAACAAAACCAGAGCTCTATCTCTAATGGACCACCGATCAGTTCGTCGTCAAACCCGAGCCATCCATTCCGAGGCGCGCATCACCGGCGGGCACATTCCGAGGTATATTTCCGGCTGCCTAACGATCTCGATCTGGTATCTGACCCGTTCGATGGCCCATCTGGTACCTTGGGATCTGAGGACGACCTTTTCTCCACTTTCATGGACATCGAGAAGTTTGGATCCAAACTCGACGACGGACCCTCTAAACCCGACATTGCTGGCGGTAATTTTCATCCGGACCGCCCTAGGCATCGCCATAGCAGTTCCGTTGATGGCTCTTCGCTTTTGGATGCTATAGAGGCTAAGAAGGCCATGGATCCTGATAAGCTCGCCGAGTTATGGACCATTGATCCCAAGAGAGCCAAAAGGATTTTGGCAAATAGACAGTCTGCTGCTCGTTCAAAAGAGAGGAAAGCCCGCTACATAACAGAGCTTGAGAGAAAAGTTCAAACCCTTCAAACTGAAGCCACCACACTTTCTGCTCAGCTAACTTTGTTCCAGAGAGATACAACAGGCTTGTGTACCGAAAACACCGAGCTCAAGCTTCGTTTACAAGCCATGGAACAACAAGCCCAGTTGCATGATGCTCTAAATGAAGCACTGAAAAAGGAAGTAGAGCAGCTCAAGATTGCTACAGGAGAAATACTGACACACACCGAAACTTTTAATTTCGGAATGCAGCATATGCCCTACACCCAGTCATGGTTTTCAAACCAGCCACAAGCCGGCCAACAGGATCCCCAGAACATTCAAAGGCCTGATCATCAAGTTCAAGCATTCCAGTCTAATTTTTCGGGCCCTCATCAGAGCCAACTTTCCGGGTCCCAGTCACACGACTTCTCTGAAATGTTACAGCAAGATCCTATCGGGCAGTTGCAGCTGCAGGGACTTGATATTGGTGGTAGAGGCTCCCATATAATAAAGCCTGAAGGTTCCTCTATTTCCATTAGTGAAAGCAGCAGTACGTTTTGA | 1098 | 48.45 | MARRKSERRREEGRSMEMKDPSNSNPSSQQNQSSISNGPPISSSSNPSHPFRGAHHRRAHSEVYFRLPNDLDLVSDPFDGPSGTLGSEDDLFSTFMDIEKFGSKLDDGPSKPDIAGGNFHPDRPRHRHSSSVDGSSLLDAIEAKKAMDPDKLAELWTIDPKRAKRILANRQSAARSKERKARYITELERKVQTLQTEATTLSAQLTLFQRDTTGLCTENTELKLRLQAMEQQAQLHDALNEALKKEVEQLKIATGEILTHTETFNFGMQHMPYTQSWFSNQPQAGQQDPQNIQRPDHQVQAFQSNFSGPHQSQLSGSQSHDFSEMLQQDPIGQLQLQGLDIGGRGSHIIKPEGSSISISESSSTF | 365 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 607378 | 610061 | + | Conep05aG0014400.1 | Cone5ag0141 | 437159 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0141 | 365 | MobiDBLite | consensus disorder prediction | 19 | 50 | - | - | |
Cone5ag0141 | 365 | SUPERFAMILY | Leucine zipper domain | 161 | 212 | IPR046347 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone5ag0141 | 365 | Coils | Coil | 226 | 253 | - | - | |
Cone5ag0141 | 365 | CDD | bZIP_plant_RF2 | 162 | 211 | IPR044759 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone5ag0141 | 365 | Coils | Coil | 177 | 204 | - | - | |
Cone5ag0141 | 365 | SMART | brlzneu | 157 | 221 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone5ag0141 | 365 | ProSiteProfiles | Basic-leucine zipper (bZIP) domain profile. | 159 | 222 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone5ag0141 | 365 | Pfam | bZIP transcription factor | 161 | 207 | IPR004827 | GO:0003700(InterPro)|GO:0006355(InterPro) | |
Cone5ag0141 | 365 | MobiDBLite | consensus disorder prediction | 118 | 132 | - | - | |
Cone5ag0141 | 365 | MobiDBLite | consensus disorder prediction | 345 | 365 | - | - | |
Cone5ag0141 | 365 | FunFam | probable transcription factor PosF21 | 160 | 213 | - | - | |
Cone5ag0141 | 365 | PANTHER | TRANSCRIPTION FACTOR POSF21-RELATED | 37 | 313 | - | GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone5ag0141 | 365 | MobiDBLite | consensus disorder prediction | 1 | 18 | - | - | |
Cone5ag0141 | 365 | Gene3D | - | 160 | 212 | - | - | |
Cone5ag0141 | 365 | MobiDBLite | consensus disorder prediction | 1 | 57 | - | - | |
Cone5ag0141 | 365 | MobiDBLite | consensus disorder prediction | 103 | 134 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone11ag0660 | Cone-Chr11:4403987 | Cone5ag0141 | Cone-Chr5:607378 | 1.21E-56 | dispersed | |
Cone17ag0790 | Cone-Chr17:6123935 | Cone5ag0141 | Cone-Chr5:607378 | 1.79E-09 | dispersed | |
Cone18ag0852 | Cone-Chr18:5842041 | Cone5ag0141 | Cone-Chr5:607378 | 2.45E-56 | dispersed | |
Cone1ag0784 | Cone-Chr1:53851457 | Cone5ag0141 | Cone-Chr5:607378 | 3.87E-33 | dispersed | |
Cone20ag0385 | Cone-Chr20:1803649 | Cone5ag0141 | Cone-Chr5:607378 | 1.96E-51 | dispersed | |
Cone4ag1506 | Cone-Chr4:11704846 | Cone5ag0141 | Cone-Chr5:607378 | 1.70E-10 | dispersed | |
Cone5ag0141 | Cone-Chr5:607378 | Cone8ag1245 | Cone-Chr8:10426305 | 8.78E-43 | dispersed | |
Cone1ag1620 | Cone-Chr1:57637603 | Cone5ag0141 | Cone-Chr5:607378 | 1.45E-152 | wgd | |
Cone5ag0141 | Cone-Chr5:607378 | Cone5ag1039 | Cone-Chr5:4543506 | 3.02E-43 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46094 | PF03062 | MBOAT | 4.80E-39 | CL0517 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0141 | - | - | - | 0.0 |