Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0147 ATGGATCTTGAATTTGGCAAGTGTTGGGATACTTCAAAGAAGGAATCATGGAAAACGATCCTTGTCTTGGCTTACCAAAGCCTTGGCGTAGTTTATGGAGACTTGAGCATTTCACCCCTATACGTTTACAAGAGCACTTTTGCAGATGACATTCAACATACGGAGAGCAATGAAGAAATCTATGGTGTTCTTTCCTTTGTCTTCTGGACCCTTACTCTGCTACCACTATTCAAGTATGTGTTTGTGGTTCTTCGAGCCGATGACAATGGGGAAGGTGGTACTTTTGCCCTGTATTCCTTGATATGTAGGCATGTGAAAGTAAGCCTTGTTCCGAACCGACAAGTTGCAGATGAATCTCTCTCTACTTATAAGTTGGAGCACCCGCCAGAGAAAAAAAGTCATTCTAGAGTCAAAATGTTGCTTGAGAAGCACAAGAGTTTGCACATTTCGTTGCTGATTCTGGTTCTTCTTGGCACTTGTATGGTTATTGGTGATGGATTGCTTACTCCAGCTATTTCTGTTTTTTCTGCAGTTTCAGGCCTTGAGTTATACATGTCTAAGGAACATCACGAATATGCGGTTGTTCCAATTACTTGCTTTATCTTGATCTGCCTATTTGCACTTCAACACTATGGTACTCATCGGATGGGATTCATTTTCGCACCAGTTGTGCTGCTGTGGCTACTATGCATCAGTGCTCTCGGCTTGTACAACATAATTCACTGGAACCCACATGTTTATAAGGCTCTTTCTCCCTATTACATGTTCAAGTTTCTAGCAAAGACTAGGATTAGTGGATGGATGTCTTTGGGTGGTATATTGTTGTGCATAACAGGGGCAGAGGCAATGTTTGCTGATCTCGGCCATTTTTCATATGCTGCCATACAGATTGCTTTTACCCTTCTGGTTTATCCAGCTCTTATACTAGCTTATATGGGTCAAGCTGCTTACTTGTCGCAACATCACGGCAGTAGCGATCGGATTAGTTTCTATATCTCAGTTCCAGAGAGTGTAAGGTGGCCGGTTCTTGTCTTGGCCATTCTTGCTTCTGTTGTGGGAAGCCAAGCAATAATCACCGGAACATTCTCAATCATCAATCAGAGCCAATCACTAGGATGCTTCCCGAGAGTCAAAGTTGTTCACACCTCGGACAAAATTCATGGTCAGATCTATATTCCTGAGATCAACTGGATGTTAATGATCCTCTGCATTGCTGTCACCATTGGATTTAGAGACACCAAACACTTGGGCAATGCATCAGGTCTAGCTGTAATGACAGTGATGTTAGTAACAACATGCCTCACTTCCTTAGTGATAATCCTATGTTGGCACAAACCCCCTCTTCTAGCCCTTTCCTTCCTCCTTTTCTTCGGGTCTATAGAACTACTCTACTTCTCTGCTTCACTAACCAAATTCCGGGAAGGTGCTTGGCTCCCAATCCTCCTAGCTCTCTTTCTCATGACCATCATGTTTGTCTGGCACTATGCAACCGTCAAAAAATATGAATTTGACCTCCACAACAAGGTCTCCTTAGAATGGCTACTAGCCCTCGGCCCAAGTATCGGAATTTCCCGGGTACCCGGAATAGGTCTCGTCTTCACCGACCTCACCTCTGGCATCCCTGCTAACTTCTCCCGCTTCGTAACTAACCTCCCAGCCTTTCACCAAGTCCTTGTCTTTGTTTGCGTCAAGTCTGTGCCCGTCCCTTTCGTACCCCCTGCCGAGCGGTACCTTGTGGGCCGCGTGGGCCCTGCAGCCCATCGGTCATACAGGTGTATAGTCCGGTACGGATACCGAGACGTTCATCAAGATGTTGATTCGTTTGAGACAGAATTGGTTGACAGGCTGGCGGATTTTATCCGGTATGATTGGAGTCGGGCCCACGAGGAGGATGCATCTCGATCGAACGAATCATCGAGCGAGTCTAGGTTAGCTGTGATTGGGACGGTGACCTTTTCGGGCCCGCCTCCTTACGAGATGGAGCATGGTGTGGACCCTGCAAGTGTGTCTACTATACAGAGTGTAACAGATGTGATTGAGATGGAACAATTTGGCACAGGGAATAAAAAACGGGTGACATTTTTTATCGATGATGAGTCGGAAACTGAGTCAACAGCTGAGATGAATGGTTTGTTACGGGAAGAGTTGGGAGATTTGCTTGCTGCTCAGCAAGCAGGGACTGCTTTCATTCTGGGGCATTCCCATGTTAGGGCGAAACAGGGGTCATCGTTTTTTAAGACTCTGGCAATTAATTACGGGTATAATTTCTTGAGGAGGAATTGTCGGGGTGCCGACGTGTCTCTTAAGGTCCCACCAGTGTCTCTCCTAGAAGTTGGGATGGTCTATATCGTGTAA 2355 45.73 MDLEFGKCWDTSKKESWKTILVLAYQSLGVVYGDLSISPLYVYKSTFADDIQHTESNEEIYGVLSFVFWTLTLLPLFKYVFVVLRADDNGEGGTFALYSLICRHVKVSLVPNRQVADESLSTYKLEHPPEKKSHSRVKMLLEKHKSLHISLLILVLLGTCMVIGDGLLTPAISVFSAVSGLELYMSKEHHEYAVVPITCFILICLFALQHYGTHRMGFIFAPVVLLWLLCISALGLYNIIHWNPHVYKALSPYYMFKFLAKTRISGWMSLGGILLCITGAEAMFADLGHFSYAAIQIAFTLLVYPALILAYMGQAAYLSQHHGSSDRISFYISVPESVRWPVLVLAILASVVGSQAIITGTFSIINQSQSLGCFPRVKVVHTSDKIHGQIYIPEINWMLMILCIAVTIGFRDTKHLGNASGLAVMTVMLVTTCLTSLVIILCWHKPPLLALSFLLFFGSIELLYFSASLTKFREGAWLPILLALFLMTIMFVWHYATVKKYEFDLHNKVSLEWLLALGPSIGISRVPGIGLVFTDLTSGIPANFSRFVTNLPAFHQVLVFVCVKSVPVPFVPPAERYLVGRVGPAAHRSYRCIVRYGYRDVHQDVDSFETELVDRLADFIRYDWSRAHEEDASRSNESSSESRLAVIGTVTFSGPPPYEMEHGVDPASVSTIQSVTDVIEMEQFGTGNKKRVTFFIDDESETESTAEMNGLLREELGDLLAAQQAGTAFILGHSHVRAKQGSSFFKTLAINYGYNFLRRNCRGADVSLKVPPVSLLEVGMVYIV 784
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 624725 628528 + Conep05aG0015000.1 Cone5ag0147 437165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0147 784 Pfam K+ potassium transporter C-terminal domain 527 782 IPR053952 -
Cone5ag0147 784 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 14 783 IPR003855 GO:0005886(PANTHER)|GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
Cone5ag0147 784 Pfam K+ potassium transporter integral membrane domain 23 515 IPR053951 -
Cone5ag0147 784 NCBIfam potassium uptake protein 23 783 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0124 Cone-Chr11:557052 Cone5ag0147 Cone-Chr5:624725 0 dispersed
Cone13ag1030 Cone-Chr13:8573063 Cone5ag0147 Cone-Chr5:624725 0 dispersed
Cone16ag0914 Cone-Chr16:9393558 Cone5ag0147 Cone-Chr5:624725 0 dispersed
Cone19ag1020 Cone-Chr19:7621060 Cone5ag0147 Cone-Chr5:624725 0 dispersed
Cone2ag0141 Cone-Chr2:749211 Cone5ag0147 Cone-Chr5:624725 0 dispersed
Cone5ag0147 Cone-Chr5:624725 Cone8ag0650 Cone-Chr8:6474351 0 dispersed
Cone1ag1624 Cone-Chr1:57651789 Cone5ag0147 Cone-Chr5:624725 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0147 K03549 - vvi:100232992 1319.68