Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0149 | ATGGGCGCTGTTAGCAACACTCGTTTTTCTCAGGTGCTCATTGCTCCTCCTGAGAGTGGAAAATTCTTGAAGAACACGAACAAGACCAAAAACTACGTTCCGTTAAATTTCATGCTTTCCGCAAACTCCATGAAATTGAACAAAATCAGCTGCAAATTGCATGAAAGTGGGATTCATGAAAAGCCCACCAGTGTCGGAGCATCAAATCCCAAGAACAGAATGGAAGAGTACAATATAGCAATGAAGAAAATGATGAGGAACCCTTATGAGTATCACCATGAACTGGGCATGAACTACACACTGATAACGGATGATTTGATTGTCGGGTCCCAGCCTCAGAAACCTGAAGATATAGATCACCTAAAACAGGAAGAGAATGTGGCTTACATTCTTAATTTGCAGCAGGATAAGGATGTTGAGTATTGGGGAATTGATTTGCAATCTATAATCAAAAGATGTCAACAACTCGGAATTCGTCATATGAGGAGGCCTGCAAGAGATTTCGATCCAGATTCCTTGCGAAGTGGATTACCGAAGGCAGTTTCATCATTAGAGTGGGCAATTTCTGAGGGGAAGGGAAAAGTTTATGTTCATTGCACTGCTGGACTTGGAAGAGCCCCTGCCGTGGCAATTGCTTACATGTTCTGGTTTTGTGGAATGAATCTGAATACAGCATATAAGACTCTAACTTCAAAGAGACCATGTGGACCAAATAAAAGAGCGATTCGCGGAGCTACTTATGATCTAGCAAAGAATGATCCATGGAAGGAGCCCTTTGAGATCCTCTCCAATAATGCTTTCGGGGATGTTGCCGACTGGGAAAGAAAATCGATCCGGGACCGTGTTCATTCCCTTAGGGGAACTTAA | 867 | 42.79 | MGAVSNTRFSQVLIAPPESGKFLKNTNKTKNYVPLNFMLSANSMKLNKISCKLHESGIHEKPTSVGASNPKNRMEEYNIAMKKMMRNPYEYHHELGMNYTLITDDLIVGSQPQKPEDIDHLKQEENVAYILNLQQDKDVEYWGIDLQSIIKRCQQLGIRHMRRPARDFDPDSLRSGLPKAVSSLEWAISEGKGKVYVHCTAGLGRAPAVAIAYMFWFCGMNLNTAYKTLTSKRPCGPNKRAIRGATYDLAKNDPWKEPFEILSNNAFGDVADWERKSIRDRVHSLRGT | 288 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 631863 | 633721 | - | Conep05aG0015200.1 | Cone5ag0149 | 437167 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0149 | 288 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 90 | 240 | IPR029021 | - | |
Cone5ag0149 | 288 | Pfam | Dual specificity phosphatase, catalytic domain | 119 | 235 | IPR000340 | GO:0016311(InterPro) | |
Cone5ag0149 | 288 | FunFam | Phosphoglucan phosphatase LSF2, chloroplastic | 81 | 288 | - | - | |
Cone5ag0149 | 288 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 175 | 234 | IPR000387 | GO:0016311(InterPro) | |
Cone5ag0149 | 288 | SMART | dsp_5 | 98 | 248 | IPR020422 | GO:0006470(InterPro) | |
Cone5ag0149 | 288 | PANTHER | DUAL SPECIFICITY PHOSPHATASE, SUBGROUP, CATALYTIC DOMAIN | 41 | 256 | IPR052832 | GO:0005983(PANTHER)|GO:0009507(PANTHER)|GO:0019203(PANTHER)|GO:0046838(PANTHER)|GO:2001070(PANTHER) | |
Cone5ag0149 | 288 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 98 | 255 | IPR020422 | GO:0006470(InterPro) | |
Cone5ag0149 | 288 | CDD | DSP_laforin-like | 97 | 244 | IPR045204 | GO:0019203(InterPro) | |
Cone5ag0149 | 288 | Gene3D | Protein tyrosine phosphatase superfamily | 81 | 288 | IPR029021 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1393 | Cone-Chr1:56720858 | Cone5ag0149 | Cone-Chr5:631863 | 3.47E-41 | dispersed | |
Cone5ag0149 | Cone-Chr5:631863 | Cone5ag0384 | Cone-Chr5:1640964 | 4.43E-44 | dispersed | |
Cone1ag1626 | Cone-Chr1:57658709 | Cone5ag0149 | Cone-Chr5:631863 | 9.63E-79 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0149 | - | - | - | 0.0 |