Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0167 ATGGAGACGCAAAACCATATTTTCCAGACCTTATATAAATACCCATTTGGCAGCAACAGCTGCGTTTCCGACGAGAAGAAGGAAAAATGGAAGAAGATGATTATTTCTCTTCTACTGCTCATTTCAATCATTCAACCTGTTTCCAGCCAGATTTGGGACGGTGTAATCGTAACCCAAGCAGATTACCAAGCCCTTCAAGCATTCAAGCGTGAACTAATTGACCCGAGAGGGTTCTTAAAGAGCTGGAACGATAGCGGTTACGGAGCTTGTTCTGGCGGATGGGCTGGGATCAAGTGTGCTCAGGGCCAGGTTATAGTTATCCAGCTTCCATGGAAAGGATTAGGCGGTCAAATCTCAGAGAAAATCGGCCAACTTCAAGCACTGCGTAAACTTAGCCTCCATGATAACTTTATTGCCGGAGCAATCCCTTTCTCATTAGGGTTTCTTCCAAATCTAAGAGGAGTTCAACTCTTCAACAATCGGCTTTCAGGTTCAATCCCTCCTTCTTTAGGCTCTTGCCCTGTTCTTCAAAGCCTTGATATTAGTAACAATTTGCTTTCTGGGTCTATCCCTTATAGCCTTGCAAACTCTACTAGGCTTTTCTGGCTTAATCTCAGCTTCAATTCCTTTTTGGGTCCGATTCCCACGAGTCTTACTCGCTCCCCTTCACTCACTTTTCTTTCTCTTCAACATAACAATCTCTCTGGCTCCTTACCTGATTCATGGGGTATAGTACCAAAAAATACGGTTTTTAAACTTAAGTCCTTAATCCTTGATGATAACCTATTTTCTGGAAGAATTCCTGCTTCTCTGGGTAATTTGACCGAGCTTGAAGTTGTTTCGATTAGTCATAATAACATTGACGGTCAAATCCCAGAAAGTTTTAGTAGATTCCATAACCTCTCTGTTTTGAACTTGTGTAAAAATCGACTCAATGGACATATTCCGGAAAGTATAGGGAACATTTCGACTCTTACTCAGCTCGATTTATCGGAAAATAATCTAACTGGAGAAATCCCGGCTTCCCTTACCAATCTACAGAGTCTTATCTCGTTCAATGTTTCTTACAATAACCTTTCCGGCTCTGTTCCCTCTGCTCTGTCTGAAAAATTCAATGCAAGTTCCTTTGTGGGGAACATTCAGTTATGTGGTTACACTGGTTCGACCCCATGTCCTTCTCCCGCCCCTTCTCAATCTGTGTCGGGACCACCTCCCGGAATATCAAAACGCCACCGTCGATTAAGTACCAAAGACATAATACTGATAGCAGCCGGAGCTCTCCTTATAGTATTGCTTTTACTCTGCTGCATTTTGATTTGTTGCTTGATAAGGAAACGGGCTGCTTCAAAAGGAAAGAATGGTGGTCAAGCTGCAGGAAGAGCGGAAAGGGGTGAGAAGGGGGTACCACCAGTCGGCGGTGAAGTCGAATCTGGTGGAGATTCCGGTGGAAAGCTAATCCATTTTGACGGTCCAATGGTCTTCACAGCAGACGATCTTCTATGTGCAACTGCAGAGATTATGGGGAAGAGCACTTATGGGACGGTCTATAAAGCCACTCTTGAGGATGGAAGTCAAGTGGCCGTAAAGAGATTGAGAGAGAAGATCACGAAAAGTCAAAGGGAATTCGAATACGAAGTCAACGTTCTCGGGAAAATCCGGCACCCGAATCTCTTGGCTTTACGGGCTTATTACCTAGGACCCAAAGGAGAAAAGCTTTTGGTATTTGATTACATGCCTAAAGGAAGCCTTGCTTCATTCCTTCATGCGCGCGGGCCCGACACATTCATCGATTGGCCAACAAGGATGAAGATAGCAAAGGGAATGACAAGGGGCTTGTTCCACCTCCACAACCAAGAAAACATCATACACGGAAATCTTACGTCTAGTAATGTCCTTCTCGATGATCAGACAAACACTAAGATATCGGATTTCGGTCTTTCTCGGCTAATGACAACTGCCGCAAATTCTAATGTCATTGCAACTGCTGGAGCATTGGGATATAGAGCACCCGAGCTATCAAAGCTTAAGAAAGCCAACACGAAGACCGACATATACAGCCTTGGAGTGATCATATTGGAACTTTTAACAGGGAAATCCCCAGGCGAGGCGATGAACGGTGCGGATTTGCCGCAATGGGTAGCCTCGATTGTTAAGGAGGAGTGGACTAATGAAGTTTTTGATGTGGAGTTGATGAGGGATGTGTCTAGTATTGGAGATGAGTTGCTTAATACGTTGAAACTAGCTTTACATTGTGTGGACCCTTCACCTTCTGCAAGACCGGAAGTTCAACAAGTTTTGCAACAGTTGGAGGAGATTAGACCGGAAGATGGCTATGCGGGGCCCAGTTTGGGTGGTGGAGACGATGTGGCGGGAGGAGTGGCTTCTACAAGTGATGAGTGA 2400 44.71 METQNHIFQTLYKYPFGSNSCVSDEKKEKWKKMIISLLLLISIIQPVSSQIWDGVIVTQADYQALQAFKRELIDPRGFLKSWNDSGYGACSGGWAGIKCAQGQVIVIQLPWKGLGGQISEKIGQLQALRKLSLHDNFIAGAIPFSLGFLPNLRGVQLFNNRLSGSIPPSLGSCPVLQSLDISNNLLSGSIPYSLANSTRLFWLNLSFNSFLGPIPTSLTRSPSLTFLSLQHNNLSGSLPDSWGIVPKNTVFKLKSLILDDNLFSGRIPASLGNLTELEVVSISHNNIDGQIPESFSRFHNLSVLNLCKNRLNGHIPESIGNISTLTQLDLSENNLTGEIPASLTNLQSLISFNVSYNNLSGSVPSALSEKFNASSFVGNIQLCGYTGSTPCPSPAPSQSVSGPPPGISKRHRRLSTKDIILIAAGALLIVLLLLCCILICCLIRKRAASKGKNGGQAAGRAERGEKGVPPVGGEVESGGDSGGKLIHFDGPMVFTADDLLCATAEIMGKSTYGTVYKATLEDGSQVAVKRLREKITKSQREFEYEVNVLGKIRHPNLLALRAYYLGPKGEKLLVFDYMPKGSLASFLHARGPDTFIDWPTRMKIAKGMTRGLFHLHNQENIIHGNLTSSNVLLDDQTNTKISDFGLSRLMTTAANSNVIATAGALGYRAPELSKLKKANTKTDIYSLGVIILELLTGKSPGEAMNGADLPQWVASIVKEEWTNEVFDVELMRDVSSIGDELLNTLKLALHCVDPSPSARPEVQQVLQQLEEIRPEDGYAGPSLGGGDDVAGGVASTSDE 799
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 695792 698279 + Conep05aG0017000.1 Cone5ag0167 437185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0167 799 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 98 395 - -
Cone5ag0167 799 SUPERFAMILY RNI-like 121 364 - -
Cone5ag0167 799 Pfam Leucine Rich Repeat 325 346 IPR001611 GO:0005515(InterPro)
Cone5ag0167 799 Pfam Leucine Rich Repeat 223 242 IPR001611 GO:0005515(InterPro)
Cone5ag0167 799 Pfam Leucine Rich Repeat 151 173 IPR001611 GO:0005515(InterPro)
Cone5ag0167 799 Pfam Leucine Rich Repeat 176 196 IPR001611 GO:0005515(InterPro)
Cone5ag0167 799 Pfam Leucine Rich Repeat 348 368 IPR001611 GO:0005515(InterPro)
Cone5ag0167 799 Gene3D Phosphorylase Kinase; domain 1 507 578 - -
Cone5ag0167 799 MobiDBLite consensus disorder prediction 451 479 - -
Cone5ag0167 799 Pfam Protein tyrosine and serine/threonine kinase 504 769 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag0167 799 Gene3D Ribonuclease Inhibitor 57 249 IPR032675 -
Cone5ag0167 799 FunFam Leucine-rich repeat receptor-like protein kinase 486 577 - -
Cone5ag0167 799 Pfam Leucine rich repeat 252 311 IPR001611 GO:0005515(InterPro)
Cone5ag0167 799 FunFam Pollen receptor-like kinase 1 578 780 - -
Cone5ag0167 799 Pfam Leucine rich repeat N-terminal domain 60 99 IPR013210 -
Cone5ag0167 799 ProSiteProfiles Protein kinase domain profile. 501 772 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0167 799 SUPERFAMILY Protein kinase-like (PK-like) 505 770 IPR011009 -
Cone5ag0167 799 CDD STKc_IRAK 507 772 - -
Cone5ag0167 799 Gene3D Transferase(Phosphotransferase) domain 1 579 779 - -
Cone5ag0167 799 MobiDBLite consensus disorder prediction 773 799 - -
Cone5ag0167 799 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 41 776 IPR052451 -
Cone5ag0167 799 Gene3D Ribonuclease Inhibitor 250 392 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0811 Cone-Chr11:6608027 Cone5ag0167 Cone-Chr5:695792 1.06E-70 dispersed
Cone5ag0167 Cone-Chr5:695792 Cone7ag0668 Cone-Chr7:3576910 2.82E-70 dispersed
Cone1ag1640 Cone-Chr1:57709724 Cone5ag0167 Cone-Chr5:695792 0 wgd
Cone13ag1426 Cone-Chr13:10242041 Cone5ag0167 Cone-Chr5:695792 4.85E-172 wgd
Cone18ag0796 Cone-Chr18:4626967 Cone5ag0167 Cone-Chr5:695792 3.18E-69 wgd
Cone19ag1424 Cone-Chr19:9287649 Cone5ag0167 Cone-Chr5:695792 2.51E-168 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82816 PF01176 eIF-1a 1.00E-09 CL0021 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0167 - - - 0.0