Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0192 | ATGCCACTTAACTATCCATTGTCTCCATTATTCTCACCTGCAATGATTGCTTCAATCTTGCATAACCCATCAGGCTCTTCTCCAGCTTGTTCTTCGCCTCGATCACCGCCATCTTCATCTCCCTCGCCGTCAAGTACTACTTTTTCTCTTCGGTTTCAGAAACCGTCTAATAATGAATGCCCCAAGGGCGGTGTGATTTTGAACAGGAAAAGACCAGCAAGGATTAACATACCAACTTCCATGTCACTATGTCTCGTTGATACACCAAAGGATGAGAAAGTAGTAATAGATACGCTGGAGGTAGAAGAAAATGGTTATTCAGTTTATTGTAAGAGAGGGAGAAGAGGTTACGCTATGGAGGATCGGTATTCCGCCTTAGTCGATCTTCAAGGAGATTCCAAACAGGCATTCTTTGGTGTGTTTGATGGGCATGGGGGAGCAAAAGCTGCGGAATTTGCCGCGAATAAGATTGGTAAGAACATAATGGATCAAGTGAGTAAGAGGAGAGAAGAGGAAGTCAAGGAAGCCATTAAAGATGGGTACTTAATGACGGATAAAGAACATTTAGGTGAAGGTATTGGTGGAGGTACTTGTTGTGTAACCGCATTGATCCAAAACGATAACCTCATAGTTTCAAATGCCGGTGATTGCCGTGCCGTTATGAGTGTCCTAGGAAATGCAGAAGCCCTAACTTTCGATCACCGCCCTTCAAGAGAAGACGAAAGAAACAGAATTACAACCATGGGCGGTTATGTTGATAAAAGTTGCGGCGGCGTTTGGAGAATAGAGGGATCTCTAGCCGTATCGAGAGGAATCGGAGATCAACATCTTAAACAATGGGTTATTTCAGAGCCAGAGACTAAAGTAATAAGGATTAACAAATCCGAATACGAGTTCTTAATACTTGCTTCTGATGGACTTTGGGACAGGGTTAGTAATCAGGAGGCAGTGGATGTAGTTCGTCGTTCATGCATCGGTGCCGATCATGATCGTCGTATAGAGTCGAAGATGTTGTTTTCTGCTTGTAAAGAACTTGTGGAATTGTCTGTAACAAGAGGCTCGATTGACGACATTAGTGTTGTGATCATTGATTTGGGTTGCTTTGTCTCATGA | 1113 | 43.22 | MPLNYPLSPLFSPAMIASILHNPSGSSPACSSPRSPPSSSPSPSSTTFSLRFQKPSNNECPKGGVILNRKRPARINIPTSMSLCLVDTPKDEKVVIDTLEVEENGYSVYCKRGRRGYAMEDRYSALVDLQGDSKQAFFGVFDGHGGAKAAEFAANKIGKNIMDQVSKRREEEVKEAIKDGYLMTDKEHLGEGIGGGTCCVTALIQNDNLIVSNAGDCRAVMSVLGNAEALTFDHRPSREDERNRITTMGGYVDKSCGGVWRIEGSLAVSRGIGDQHLKQWVISEPETKVIRINKSEYEFLILASDGLWDRVSNQEAVDVVRRSCIGADHDRRIESKMLFSACKELVELSVTRGSIDDISVVIIDLGCFVS | 370 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 795244 | 796628 | - | Conep05aG0019600.1 | Cone5ag0192 | 437210 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0192 | 370 | PANTHER | PROTEIN PHOSPHATASE | 98 | 364 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone5ag0192 | 370 | MobiDBLite | consensus disorder prediction | 41 | 56 | - | - | |
Cone5ag0192 | 370 | MobiDBLite | consensus disorder prediction | 23 | 65 | - | - | |
Cone5ag0192 | 370 | ProSiteProfiles | PPM-type phosphatase domain profile. | 105 | 365 | IPR001932 | - | |
Cone5ag0192 | 370 | SMART | PP2C_4 | 98 | 363 | IPR001932 | - | |
Cone5ag0192 | 370 | Gene3D | - | 97 | 367 | IPR036457 | - | |
Cone5ag0192 | 370 | FunFam | probable protein phosphatase 2C 25 | 98 | 368 | - | - | |
Cone5ag0192 | 370 | ProSitePatterns | PPM-type phosphatase domain signature. | 137 | 145 | IPR000222 | GO:0043169(InterPro) | |
Cone5ag0192 | 370 | Pfam | Protein phosphatase 2C | 119 | 357 | IPR001932 | - | |
Cone5ag0192 | 370 | CDD | PP2Cc | 104 | 365 | IPR001932 | - | |
Cone5ag0192 | 370 | SUPERFAMILY | PP2C-like | 105 | 366 | IPR036457 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag0192 | Cone-Chr5:795244 | Cone7ag0053 | Cone-Chr7:230820 | 6.75E-124 | dispersed | |
Cone1ag1663 | Cone-Chr1:57808702 | Cone5ag0192 | Cone-Chr5:795244 | 9.12E-229 | wgd | |
Cone4ag0057 | Cone-Chr4:293560 | Cone5ag0192 | Cone-Chr5:795244 | 6.00E-123 | wgd | |
Cone4ag1446 | Cone-Chr4:11479275 | Cone5ag0192 | Cone-Chr5:795244 | 8.89E-47 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0192 | K17506 | - | mdm:114825896 | 377.481 |