Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0206 ATGTCTCTGTTTCTTCTTTTTACCGTTTTTATCTCCACGGTCATTTTATCTTTCTTCCTCTCCCTCCGCGCCTTATGTTTCCGGCGGTTTAACTTACCGCCGGGAAATCTAGGCCTACCCTTTATCGGCGAGACTCTTCAGCTTATCTCAGCTTACAAGACTGAGAACCCTGAACCATTCATCGACCAGAGGGTAAACCGGTTCGGTCCGGTATTCACCACCCACTTGTTTGGTGAGCCCACGGTGTTCTCTACCGATCCGGAAACGAACCGGTTCATTTTGCAGAACGAAGGGAAGCTAATCGAGTCGAGCTATCCTGGCTCAATATCGAATTTATTAGGAAGGCACTCTTTGCTTATCATGACCGGAAATCTTCATAAGAAAATGCATTCCTTAACTATGAGCTTCGCTAACTCTTCAATTATTCGGGATCATCTTCTGGTTGATATAGACCGGTTGATCCGGCTCAGCTTGGATTCCTGGGCCGGCAAGATCTTTCTTATGGAAGAAGCCAAGAAGATAACATTTGAGCTAGCAGTGAAGCAGCTTATGAGCTTTGATCCAGGAGAATGGACGGAGAGTTTAAGGAAAGAGTACGTGCTCGTTATTGACGGTTTTTTCACTGTTCCGTCTTCTCTATTGTCCTCAACCTATAGGAGAGCAATAAAGGCTCGGAGTAAGGTAGCGGAGGCGTTGAGTTTGGTAGTGAGGCAAAGGAGAGAAAGTGAAGAAGGGATGCTTAGGAGTGAGAAGAAGAATAATGACATGCTGGAAGCTCTGTTGGCATCAGACGACGGGTTAAGTGATGAGCAGATTGTGGATTTCTTGCTGGCTTTACTTGTCGCTAGTTACGAAACTACCCCTACTATCATGACCCTTGCTGTTAAGTTCCTCACCGAGACACCTCTCGCTCTGTCTCAACTCAAGGCAGAGCATGAGCAAATAAGGGCAAACAAGACCAAATCAGATGCTCTTGAATGGAATGATTACAAGTCCATGCCTTTCACTCAATGTATTGTAAATGAGACTTTACGGAGCGCCAACATCATCAGTGGCGTATTTAGGCGAGCTAAGACGGATATTCATATCAAAGGCTATACGATTCCTAAAGGATGGAAGGTTTTTGCATCATTTCGTGCCGTGCATTTGCATCCGGACCACTTCAAAGATGCTCGTTCTTATAATCCATGGAGATGGCAGGAACTACAACAACGACAACCAGTCCTGTGA 1230 45.45 MSLFLLFTVFISTVILSFFLSLRALCFRRFNLPPGNLGLPFIGETLQLISAYKTENPEPFIDQRVNRFGPVFTTHLFGEPTVFSTDPETNRFILQNEGKLIESSYPGSISNLLGRHSLLIMTGNLHKKMHSLTMSFANSSIIRDHLLVDIDRLIRLSLDSWAGKIFLMEEAKKITFELAVKQLMSFDPGEWTESLRKEYVLVIDGFFTVPSSLLSSTYRRAIKARSKVAEALSLVVRQRRESEEGMLRSEKKNNDMLEALLASDDGLSDEQIVDFLLALLVASYETTPTIMTLAVKFLTETPLALSQLKAEHEQIRANKTKSDALEWNDYKSMPFTQCIVNETLRSANIISGVFRRAKTDIHIKGYTIPKGWKVFASFRAVHLHPDHFKDARSYNPWRWQELQQRQPVL 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 850322 854010 - Conep05aG0021000.1 Cone5ag0206 437224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0206 409 Pfam Cytochrome P450 207 404 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0206 409 PANTHER CYTOCHROME P450 26 31 399 - GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)
Cone5ag0206 409 PRINTS E-class P450 group IV signature 333 349 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0206 409 PRINTS E-class P450 group IV signature 382 400 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0206 409 PRINTS E-class P450 group IV signature 59 82 IPR002403 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0206 409 SUPERFAMILY Cytochrome P450 25 403 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0206 409 CDD CYP90-like 64 407 - -
Cone5ag0206 409 Gene3D Cytochrome P450 25 407 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1509 Cone-Chr4:11725811 Cone5ag0206 Cone-Chr5:850322 1.90E-26 dispersed
Cone5ag0206 Cone-Chr5:850322 Cone8ag0806 Cone-Chr8:8116467 1.26E-98 dispersed
Cone1ag1219 Cone-Chr1:55977119 Cone5ag0206 Cone-Chr5:850322 2.28E-270 wgd
Cone11ag1187 Cone-Chr11:8999765 Cone5ag0206 Cone-Chr5:850322 4.59E-185 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0206 K09588 - mdm:103432823 622.854