Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0214 | ATGGAGGGCAAGGAAGAAGATGTTAGATTGGGAGCAAACAAGTTTCCAGAGAGGCAGCCCATAGGAACGGCGGCGCAGAGCCAAGATGAAGGTAAGGATTACAGAGAGCCACCTCCTGCACCATTATTCGAACCAGGGGAGCTTACTTCCTGGTCCTTCTACAGAGCTGGAATCGCAGAGTTCTTCGCTACCTTTCTCTTCCTTTACATCACGATCTTAACTGTTATGGGTGTTTCAAGGACAAGCAAGGCCAACGGTGGCAGCACGTGTGGAACTGTCGGGATTCAGGGCATCGCTTGGGCTTTTGGCGGTACGATCTTCGCCCTCGTCTACAGCACAGCCGGCATCTCAGGGGGTCACATAAATCCGGCGGTGACGTTCGGGCTGTTTCTGGCGAGGAAGTTGTCGTTGACTAGGGCGGTGTTCTACATGGTGATGCAAACACTTGGAGCGATAGCTGGTGCAGGAGTGGTCAAAGGGTTTCAGCCAAAGCTTTACCAGGAATTGGGCGGCGGGGCTAACTCTGTCAACCATGGCTACACCAAGGGCGACGGTCTTGGTGCTGAGATCGTCGGTACTTTCGTCCTTGTTTACACTGTTTTCTCCGCCACCGATGCTAAGCGTAGCGCTAGAGACTCTCACGTGCCTATTTTGGCGCCGTTGCCTATTGGGTTCGCGGTTTTCTTGGTACACTTGGCTACTATTCCGATCACCGGCACCGGAATTAACCCAGCGAGAAGTTTGGGTGCTGCGATCATTTTCAACGAGAAAAGTGCTTGGAATGACCACTGGATTTTCTGGGTGGGACCGTTCATTGGAGCAGCACTAGCAGCTTTATACCATCAGGTGGTGATCAGAGCCATTCCCTTCAAGTCCAAGTGA | 882 | 52.49 | MEGKEEDVRLGANKFPERQPIGTAAQSQDEGKDYREPPPAPLFEPGELTSWSFYRAGIAEFFATFLFLYITILTVMGVSRTSKANGGSTCGTVGIQGIAWAFGGTIFALVYSTAGISGGHINPAVTFGLFLARKLSLTRAVFYMVMQTLGAIAGAGVVKGFQPKLYQELGGGANSVNHGYTKGDGLGAEIVGTFVLVYTVFSATDAKRSARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIFNEKSAWNDHWIFWVGPFIGAALAALYHQVVIRAIPFKSK | 293 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 905811 | 907447 | + | Conep05aG0021800.1 | Cone5ag0214 | 437232 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0214 | 293 | CDD | MIP | 55 | 284 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | Gene3D | Glycerol uptake facilitator protein. | 40 | 292 | IPR023271 | - | |
Cone5ag0214 | 293 | PRINTS | Major intrinsic protein family signature | 264 | 284 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | PRINTS | Major intrinsic protein family signature | 139 | 158 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | PRINTS | Major intrinsic protein family signature | 55 | 74 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | PRINTS | Major intrinsic protein family signature | 102 | 126 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | PRINTS | Major intrinsic protein family signature | 224 | 246 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | PRINTS | Major intrinsic protein family signature | 188 | 206 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | FunFam | Probable aquaporin PIP1-2 | 40 | 293 | - | - | |
Cone5ag0214 | 293 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 292 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
Cone5ag0214 | 293 | Pfam | Major intrinsic protein | 47 | 281 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | ProSitePatterns | MIP family signature. | 120 | 128 | IPR022357 | - | |
Cone5ag0214 | 293 | NCBIfam | MIP family channel protein | 59 | 281 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cone5ag0214 | 293 | SUPERFAMILY | Aquaporin-like | 47 | 286 | IPR023271 | - | |
Cone5ag0214 | 293 | MobiDBLite | consensus disorder prediction | 1 | 40 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag0214 | Cone-Chr5:905811 | Cone6ag0785 | Cone-Chr6:4000558 | 1.44E-173 | dispersed | |
Cone1ag1227 | Cone-Chr1:56019949 | Cone5ag0214 | Cone-Chr5:905811 | 4.08E-209 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0214 | K09872 | - | csv:101215145 | 530.02 |