Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0225 | ATGGAGGCCATAGACGTTTCTCATCATGTGGTGCGTTTAGAAGAAGGAGCTTGCCGGAGCACCGTACTCAGTTCCGGCACGAGTGACTTGTCAGATGACGAGCATAGATGCTCGAGTACTGAGTTTGGAGATGAGATTGTTGGGGTGGTGGGTGAGAAAGGGAGGGGATCCTCTGCATCTGTGTGTTCGGTTGATGATGATGATCAGTTGGATCAGGAATGTGGGGTCCAGGAGGTTAAGGTACAGCTGGAAAAAGTCGAGAGGGATTGTAGGATTTGTCATCTCAGCATGGATGCAACGAATCATGAATCCGGGATTCCTATTGAGCTTGGATGTTGCTGTAAGGAGGATTTAGCTGCTGCTCATAAGGAATGTGCTGAAGCTTGGTTCAAGATCAAGGGTAACAAAACGTGCGAGATATGTGGGTCTACTGCCCAGAATGTCTCGGGTGTGAATGAAACAGAGTTGATAGAACAGTGGAACGAGTCTAACAATGCGACAATGGCATCCTCAACAACGACCGCCGCCCCTTCAACAGAGACTCGAAACTTCTGGCAGGGACATCACTTCCTTAATTTCTTGTTAGCTTGTATGGTCTTTGCCTTTGTCATCTCCTGGCTTTTTCACTTCAATGTACCGTCGTAG | 645 | 47.91 | MEAIDVSHHVVRLEEGACRSTVLSSGTSDLSDDEHRCSSTEFGDEIVGVVGEKGRGSSASVCSVDDDDQLDQECGVQEVKVQLEKVERDCRICHLSMDATNHESGIPIELGCCCKEDLAAAHKECAEAWFKIKGNKTCEICGSTAQNVSGVNETELIEQWNESNNATMASSTTTAAPSTETRNFWQGHHFLNFLLACMVFAFVISWLFHFNVPS | 214 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 957190 | 959054 | + | Conep05aG0022900.1 | Cone5ag0225 | 437243 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0225 | 214 | SUPERFAMILY | RING/U-box | 87 | 145 | - | - | |
Cone5ag0225 | 214 | ProSiteProfiles | Zinc finger RING-CH-type profile. | 82 | 148 | IPR011016 | GO:0008270(InterPro) | |
Cone5ag0225 | 214 | PANTHER | ZINC FINGER, RING-CH-TYPE | 33 | 213 | - | - | |
Cone5ag0225 | 214 | SMART | ringv_2 | 89 | 142 | IPR011016 | GO:0008270(InterPro) | |
Cone5ag0225 | 214 | Pfam | RING-variant domain | 90 | 141 | IPR011016 | GO:0008270(InterPro) | |
Cone5ag0225 | 214 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 73 | 152 | IPR013083 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone1ag1243 | Cone-Chr1:56066039 | Cone5ag0225 | Cone-Chr5:957190 | 7.67E-136 | wgd | |
Cone1ag0217 | Cone-Chr1:1322891 | Cone5ag0225 | Cone-Chr5:957190 | 2.36E-31 | wgd | |
Cone10ag0353 | Cone-Chr10:1675430 | Cone5ag0225 | Cone-Chr5:957190 | 1.13E-24 | wgd | |
Cone13ag1373 | Cone-Chr13:10010431 | Cone5ag0225 | Cone-Chr5:957190 | 7.29E-68 | wgd | |
Cone19ag1368 | Cone-Chr19:9052368 | Cone5ag0225 | Cone-Chr5:957190 | 4.67E-65 | wgd | |
Cone3ag0384 | Cone-Chr3:1932798 | Cone5ag0225 | Cone-Chr5:957190 | 7.52E-52 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0225 | - | - | - | 0.0 |