Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0246 | ATGGCGAATCCATGGTGGGCTGGAAATGTAGCCATGAGAGGTGGTGTGGACCCCATATCTCCATCTCCTTCCCTCCAGCTTAGAAACCCAGTAGATCAACAGCAGCAACAACAACAACATGGGTCGTCAGGATTGAACCACCCCTTCGTTCTAATCCGAAGAGATCAGGAGACGACTACCGGTAGTAGCAGAAGTAACCCAACCAACTCCGCTACGAGAAAAAGAACCCTAGAAGACGATGAAGTAAGCCAGGAGAACAACCAACCAGTCTCCACTCCCCAAGACAGCATCGAACCGGGCTCCAACAGTGCCAGCTCATCCCGCCGCCCTCGTGGCCGCCCTGCCGGGTCCAAAAACAAGCCCAAACCACCTGTAGTAGTCGCCAAAGAAACCCCAAATTCTCTAAGAAGCCACGTGTTGGAAATCAGCAGTGGGACTGACATTGTAGAGAGCATTGCCACCTTTGCTCAAAGCCGCCATAGAGGAGTCTCGGTCCTTAGCGGCAGCGGCATTGTGACCAATGTTACTTTCCGGCAACCGGCTGCGCCTGGCGGAGTTATCACCCTCCAAGGCAGGTTTGAGATATTGTCTTTGTCCGGAGCTTTCCTGCCCGCCCCGTCCCCACCTGGGGCAAGTGGTCTGACCGTGTATCTTGCTGGTGATCAAGGGCAGGTTGTTGGCGGCACTGTAGTTGGTGCACTCACGGCGTCCGGGCCAGTTATGGTGATTGCAGCCACATTTACGAACGCAACGTTTGAGAGATTGCCGTTTACTGATCCAGATAATGAGGTGGTGGCACACCAAGATGGGATGCGATCTGCTGGGGTGAATACGGGGACTACGGGAAATTCGACGTCTCAGGGAATGAACCAGCAACCTCCAGCTTCTACTACTGCTGCTGCTGTTGCTGTTTCAATGGCTGCACCTATGTACAATTGGGCCTCGAATGAACAGATGTCGACCCATGATGGGTTTTGGGGTACTCCTGCTAGGCCTCCTTCCTCTAACTACTGA | 1014 | 53.65 | MANPWWAGNVAMRGGVDPISPSPSLQLRNPVDQQQQQQQHGSSGLNHPFVLIRRDQETTTGSSRSNPTNSATRKRTLEDDEVSQENNQPVSTPQDSIEPGSNSASSSRRPRGRPAGSKNKPKPPVVVAKETPNSLRSHVLEISSGTDIVESIATFAQSRHRGVSVLSGSGIVTNVTFRQPAAPGGVITLQGRFEILSLSGAFLPAPSPPGASGLTVYLAGDQGQVVGGTVVGALTASGPVMVIAATFTNATFERLPFTDPDNEVVAHQDGMRSAGVNTGTTGNSTSQGMNQQPPASTTAAAVAVSMAAPMYNWASNEQMSTHDGFWGTPARPPSSNY | 337 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1041605 | 1044772 | + | Conep05aG0025100.1 | Cone5ag0246 | 437264 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0246 | 337 | MobiDBLite | consensus disorder prediction | 273 | 297 | - | - | |
Cone5ag0246 | 337 | MobiDBLite | consensus disorder prediction | 22 | 45 | - | - | |
Cone5ag0246 | 337 | CDD | DUF296 | 136 | 220 | IPR005175 | - | |
Cone5ag0246 | 337 | ProSiteProfiles | PPC domain profile profile. | 132 | 271 | IPR005175 | - | |
Cone5ag0246 | 337 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 136 | 248 | IPR005175 | - | |
Cone5ag0246 | 337 | FunFam | AT-hook motif nuclear-localized protein | 135 | 263 | - | - | |
Cone5ag0246 | 337 | MobiDBLite | consensus disorder prediction | 83 | 112 | - | - | |
Cone5ag0246 | 337 | Gene3D | - | 135 | 267 | - | - | |
Cone5ag0246 | 337 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 132 | 261 | - | - | |
Cone5ag0246 | 337 | MobiDBLite | consensus disorder prediction | 272 | 297 | - | - | |
Cone5ag0246 | 337 | MobiDBLite | consensus disorder prediction | 53 | 72 | - | - | |
Cone5ag0246 | 337 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 67 | 333 | IPR014476 | GO:0003680(InterPro)|GO:0003680(PANTHER)|GO:0003700(PANTHER)|GO:0005634(PANTHER) | |
Cone5ag0246 | 337 | MobiDBLite | consensus disorder prediction | 1 | 131 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag0246 | Cone-Chr5:1041605 | Cone9ag0727 | Cone-Chr9:3470444 | 8.63E-72 | dispersed | |
Cone1ag1260 | Cone-Chr1:56147160 | Cone5ag0246 | Cone-Chr5:1041605 | 1.11E-205 | wgd | |
Cone11ag1145 | Cone-Chr11:8815268 | Cone5ag0246 | Cone-Chr5:1041605 | 3.95E-52 | wgd | |
Cone18ag0437 | Cone-Chr18:2129411 | Cone5ag0246 | Cone-Chr5:1041605 | 8.86E-54 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0246 | - | - | - | 0.0 |