Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0275 ATGGGCAAAGATGTGGTCTTGTTGGATTTAGGGCGCAGCCCTTTTGCAGCTAGTGTGAGGATAGCTTTGGCAGAGAAAGGGATCGAGTATGAATCGAAGGAAGAAGATTTGAGCAACAAAAGCCCTCTGCTTTTGCAAATGAACCCGGTTCACAAGAAAGTCCCTGTTTTGATCCATAACGGCAGGCCCATATCCGAATCACTCGTCATTTTAGAATACATTGATGAAGTTTGGGCTCATAACTCGCCTTTACTCCCTTCCGATCCTTACGACAGAGCCCGTGCCCGATTTTGGGCTGACTACGTCATGAAGAAGATTTATACCACTGGACGAAAGCTGTGGACGACCAAAGGGGAAGAGAAGGAAGCAGCGGCAAAGGAGGTAGTAGAGTGTCTTAAGGTTCTGGAAGGTGAGGTAGGAGACAAAATGTATTTTGGTGGGGACATGTTTGGTCTGGTCGATGTGTTACTTATTTCTTTCTATTCAATTTTCTATGCTTTTAATAAGCTTGGAAATTTGAGCATAGAGACTGAATGTCCTAAACTCATCTTATGGGCTGAGAGATGTATTGAAAGGGAGACCGTCTCTAAAAATATGCCTGACAAATACGAACTTTATGATGTTCTTCTGGCACTCAGAAACAAGTTTGTAGCGGAATGA 660 43.64 MGKDVVLLDLGRSPFAASVRIALAEKGIEYESKEEDLSNKSPLLLQMNPVHKKVPVLIHNGRPISESLVILEYIDEVWAHNSPLLPSDPYDRARARFWADYVMKKIYTTGRKLWTTKGEEKEAAAKEVVECLKVLEGEVGDKMYFGGDMFGLVDVLLISFYSIFYAFNKLGNLSIETECPKLILWAERCIERETVSKNMPDKYELYDVLLALRNKFVAE 219
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1165211 1165997 - Conep05aG0028300.1 Cone5ag0275 437293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0275 219 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 5 207 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
Cone5ag0275 219 CDD GST_C_Tau 89 212 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
Cone5ag0275 219 FunFam Tau class glutathione S-transferase 1 87 - -
Cone5ag0275 219 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 88 216 IPR010987 -
Cone5ag0275 219 Gene3D - 88 219 - -
Cone5ag0275 219 SFLD Glutathione Transferase (cytosolic) 3 218 IPR040079 -
Cone5ag0275 219 SFLD Main.3: Omega- and Tau-like 3 218 IPR045073 -
Cone5ag0275 219 FunFam Glutathione S-transferase U20 88 219 - -
Cone5ag0275 219 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 82 IPR004045 -
Cone5ag0275 219 Pfam Glutathione S-transferase, C-terminal domain 113 193 IPR004046 -
Cone5ag0275 219 SUPERFAMILY GST C-terminal domain-like 76 216 IPR036282 -
Cone5ag0275 219 Pfam Glutathione S-transferase, N-terminal domain 6 76 IPR004045 -
Cone5ag0275 219 SUPERFAMILY Thioredoxin-like 4 106 IPR036249 -
Cone5ag0275 219 Gene3D Glutaredoxin 1 87 - -
Cone5ag0275 219 CDD GST_N_Tau 5 78 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone15ag0988 Cone-Chr15:7921791 Cone5ag0275 Cone-Chr5:1165211 2.03E-94 dispersed
Cone15ag0990 Cone-Chr15:7962898 Cone5ag0275 Cone-Chr5:1165211 7.40E-90 dispersed
Cone19ag1361 Cone-Chr19:9029175 Cone5ag0275 Cone-Chr5:1165211 1.72E-52 dispersed
Cone4ag0478 Cone-Chr4:2136663 Cone5ag0275 Cone-Chr5:1165211 2.43E-31 dispersed
Cone5ag0275 Cone-Chr5:1165211 Cone7ag0461 Cone-Chr7:2097555 6.39E-44 dispersed
Cone5ag0275 Cone-Chr5:1165211 Cone14ag0993 Cone-Chr14:8223914 1.07E-96 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0275 K00799 - mdm:103427999 299.286