Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0283 ATGTCTTTTCAGCCAAAGAGCTTTTGGATGCCCAGGGACGCTGGGTGTTTAACTGATGGGGAGATGAGTTATGACAGTTCATCCAGAATTGAGCCAAAGCGTGCCCAGCAGTGGTTCATGGATGGCAGTGCACCAGAGTTATTCAGCAGCAAAAAGCAAGCCAAAGAAGGTGTTAACATGAGAACTGTTCCAGGTCTGCATATGAATCTTTCGTGGGAAAACACACCAAGCTTCCATTCTGCTCCTGGGCCTTTTACTGATCGTCTCCTCGGACCTGAGCCTTTACTACCGGTGGTTGATAGAAGCATCTCTCCTGTCGGAAATACACATGTGAATGTGGAAAGGAAGGATTCTGAGAATCAGTATGGAAATGATACTTCGATGGGGTTATCTATGTCCCATTCTATTGAAGATCCCTCTTCATGTATAGATTACGGTGGAATTAGGAAAGTTAAGGTCAATCAAGTTAGGGAGTCGGAGAATGGCATGTCTGCTGCTTCCATGGGGTGCTTATATGGCAGTAGAGATACTAGTACAATATCAATGGGTACAAGGTACAGTAAAAATGATGAGAATATCATATCGTTGGGCCCAACTTACAGCAGAAGGGTTGAGAGTAACATCTCAATGGGAACTGCATTCAGTAAGACAGGTGACAATTTTATATCAATGGGTCAAATCTTCAACAAAGGTGATGGCAATTTCATTTCTATGGGTCATACCTACAACAAGGGAGGTAATGGTACCTTATCAATGGGTCAGCCCTTTGATAAAGAGGATGGGACTTTTATATCGATAGGTCAGTCTTATGAAAAGGAAGACTGCAATGTGATTTCATTAGGTACATCATACAACAAGGGCCATGAGAACTTTGTTTCCATGGGGCCATCCTACAGTAAAGCAAATGAGAATTCTACCTCCATGGTTCCAGCATATAATAAAGGGAACAATGATACTTTGTCAATGGATCCAACATACAACAAAGGGGATTCAAGTGCTCTATCTATGGGCCACATTTATAATAAGGGTGAGAGCAACGCAATATCTTTTTGTGGTTTTGATGAGGAACCGGAGACAAATCCTTCTGGTGGAATCATTAGTGGCTATGATCTCGTAATGGGTAATCAAAACTCACAAGCTTCTGAGGTATCGACCCAGAAGGATGCAGTTTATTCAAATTCTGATGTAAATGTCAACACCACTCCAAAAGCTAACTCTAAGATTGAAACCCCTTCCAAGAATAAAGAGCAAAAGATAACTAAGAAGGTTCCTCCAAATAGTTTCCCTTCAAATGTCAAGAGCTTGTTATCCACTGGTATGCTTGATGGGGTTCCTGTGAAGTACATTTCCTGGGCACGGGATAAAAAAGTTACAGGAGTTGTAAAAGGGACTGGATATTTGTGCAGCTGTGAAGACTGCAAGGAGTCTAAGGTCCTTAATGCTTATGAGTTTGAGCGTCATGCTGGTTGTAAGACGAAGCACCCAAACAATCACATCTATTTTGAGAATGGGAAGAGTATCTATGCAGTTGTTCAAGAACTGAAGAACACTCGGCAAGAGATCCTCTTCGACATGATTCAGAATGTCACAGGCTCTCCTATCAATCAAAAGAATTTCCGAGCATGGAAAGCATCATATCAAGCTGCCACCCGTGAACTTCAACGCATTTATGGAAAGGATGAGGTGATCATGCCAACTTGA 1701 42.09 MSFQPKSFWMPRDAGCLTDGEMSYDSSSRIEPKRAQQWFMDGSAPELFSSKKQAKEGVNMRTVPGLHMNLSWENTPSFHSAPGPFTDRLLGPEPLLPVVDRSISPVGNTHVNVERKDSENQYGNDTSMGLSMSHSIEDPSSCIDYGGIRKVKVNQVRESENGMSAASMGCLYGSRDTSTISMGTRYSKNDENIISLGPTYSRRVESNISMGTAFSKTGDNFISMGQIFNKGDGNFISMGHTYNKGGNGTLSMGQPFDKEDGTFISIGQSYEKEDCNVISLGTSYNKGHENFVSMGPSYSKANENSTSMVPAYNKGNNDTLSMDPTYNKGDSSALSMGHIYNKGESNAISFCGFDEEPETNPSGGIISGYDLVMGNQNSQASEVSTQKDAVYSNSDVNVNTTPKANSKIETPSKNKEQKITKKVPPNSFPSNVKSLLSTGMLDGVPVKYISWARDKKVTGVVKGTGYLCSCEDCKESKVLNAYEFERHAGCKTKHPNNHIYFENGKSIYAVVQELKNTRQEILFDMIQNVTGSPINQKNFRAWKASYQAATRELQRIYGKDEVIMPT 566
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1205653 1209401 - Conep05aG0029200.1 Cone5ag0283 437301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0283 566 MobiDBLite consensus disorder prediction 395 424 - -
Cone5ag0283 566 PANTHER AUTOIMMUNE REGULATOR 6 548 - GO:0000977(PANTHER)|GO:0003682(PANTHER)|GO:0005634(PANTHER)|GO:0042393(PANTHER)|GO:0045944(PANTHER)
Cone5ag0283 566 Pfam Tify domain binding domain 459 514 IPR032308 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1260 Cone-Chr11:9358001 Cone5ag0283 Cone-Chr5:1205653 2.59E-77 dispersed
Cone1ag1303 Cone-Chr1:56307972 Cone5ag0283 Cone-Chr5:1205653 3.03E-214 wgd
Cone13ag1327 Cone-Chr13:9804883 Cone5ag0283 Cone-Chr5:1205653 1.60E-39 wgd
Cone18ag0330 Cone-Chr18:1649622 Cone5ag0283 Cone-Chr5:1205653 2.61E-76 wgd
Cone19ag1312 Cone-Chr19:8830190 Cone5ag0283 Cone-Chr5:1205653 5.02E-40 wgd
Cone3ag0322 Cone-Chr3:1652424 Cone5ag0283 Cone-Chr5:1205653 1.76E-83 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0283 - - - 0.0