Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0301 ATGGCGATCGAGATTGCTGTCAAGGCCGCTGCTGGCCCTTTCAGCCAAAGGGTGCTCTTGACTTTGGAGGAGAAAAAGGTACCGTACAAATTTCACCTCATCAACCTCTCTGACAAACCTCAATGGTTCTTGGATGTGAATCCAGAAGGAAAAGTGCCTGCTGTGAAGTTTGATGAGAAATGGGTTTCTGATTCTGATGTCATTGTTGGAATTCTTGAGGAAAAATACCCTGAACTTTCTCTCACTCCTCCTCCTGAATTTTCCTCTGTGGGATCAAAGATATTCAGTGCTTTTGTGAAATTCCTTAAGAGTAAGGATCCAAGCGATGGGTCAGAGCAGGCTCTGCTTGACGAGTTGAAGGAATTGGACGAGCACCTTAAAGCTCATGGCCCATATATCGGCGGAGAAAAGGTCACAGCTGTTGATTTGAGTCTAGCACCGAAGCTTTATCATCTGGAGGTGGTTCTTGGCCATTTTAAGAAATGGACTGTCCCTGAAAACTTGACCCACTTCCACAAGTACAAACAGTTGCTCTTTGCCCGGGAATCGTTTGAGAAGACCAAGCCAGCTGGAACAGAGTACGTAATTGCTGGATGGGCACCGAAGGTCAATCCATGA 618 46.12 MAIEIAVKAAAGPFSQRVLLTLEEKKVPYKFHLINLSDKPQWFLDVNPEGKVPAVKFDEKWVSDSDVIVGILEEKYPELSLTPPPEFSSVGSKIFSAFVKFLKSKDPSDGSEQALLDELKELDEHLKAHGPYIGGEKVTAVDLSLAPKLYHLEVVLGHFKKWTVPENLTHFHKYKQLLFARESFEKTKPAGTEYVIAGWAPKVNP 205
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1270905 1273525 - Conep05aG0031100.1 Cone5ag0301 437319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0301 205 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 12 202 IPR044627 GO:0010731(PANTHER)|GO:0033355(InterPro)|GO:0045174(PANTHER)|GO:0045174(InterPro)|GO:0098869(InterPro)
Cone5ag0301 205 SUPERFAMILY GST C-terminal domain-like 75 196 IPR036282 -
Cone5ag0301 205 Gene3D Glutaredoxin 1 81 - -
Cone5ag0301 205 FunFam Glutathione S-transferase DHAR3, chloroplastic 82 205 - -
Cone5ag0301 205 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 58 205 IPR010987 -
Cone5ag0301 205 SFLD Main (cytGST) 11 177 - -
Cone5ag0301 205 Gene3D - 82 205 - -
Cone5ag0301 205 Pfam Glutathione S-transferase, C-terminal domain 112 165 - -
Cone5ag0301 205 CDD GST_N_family 13 69 - -
Cone5ag0301 205 SUPERFAMILY Thioredoxin-like 12 78 IPR036249 -
Cone5ag0301 205 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 80 IPR004045 -
Cone5ag0301 205 SFLD Glutathione Transferase (cytosolic) 11 177 IPR040079 -
Cone5ag0301 205 Pfam Glutathione S-transferase, N-terminal domain 13 74 IPR004045 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone2ag0396 Cone-Chr2:2082661 Cone5ag0301 Cone-Chr5:1270905 1.28E-50 dispersed
Cone1ag1319 Cone-Chr1:56385452 Cone5ag0301 Cone-Chr5:1270905 2.00E-131 wgd
Cone11ag1106 Cone-Chr11:8611417 Cone5ag0301 Cone-Chr5:1270905 3.79E-64 wgd
Cone18ag0470 Cone-Chr18:2282995 Cone5ag0301 Cone-Chr5:1270905 6.64E-33 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0301 K21888 - mdm:103435916 340.502