Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0310 ATGAGTTTTTCGGATTTTCATCTGCTTATCTTATTTTCATCTGCATTATCTTTCTTCTCCTTCTTCTCTGTTTCTTCAGGGTTCAATCCTGAAGATTCTTATCTAATAGATTGTGGCTCCTTGTCATACACAACAGTGGGGAATCGTGTATTCTCATCAGATGAGACTTACTCCAAATTTCTCTTAGATGAGAAACCTCCAATCTTCATCAATACCAGCACTCTTTCAAATTCTTCAACACCCACCCTTTATTCAGATCTGTTCAAAACTGCAAGGGTGCTTGATACAGCAACTAGTTACAGTTTCCCTATATCCAAACATGGCTGCCACTCTATCCGCCTCTACTTCCATCCCTTTTCTCATAAAAACTACACCTTGACCACTGCAACATTCTCTGTCTCTGCTCAAAACTTCACCCTCCTCAAAGATTACCGATTACAGTCTGGCTCTGTAATAAAGGAATATTCTTTGAACATAACTTCTGACACATTAGTCCTCACTTTCACTCCTTGGAACAACAATTCAATAGCATTCATCAATGCGTTAGAAGTCGTTTCAATCCCGGATAACATTTTTCCGGTCGATGTTCGGACTATTAGTCGACCGGGTAGTAACCTGAATCTACAAAACAGAGCAGTTGAGACGGCTATGAGAGTGAACATGGGAAACGTGACAGTTCTTCCTGAAAACGATGCTCTGTCACGCCTATGGATTCCGGATGGTATGTTTCTTACTCACTCTAACCTCGTAAAGTTTGTTTCGAATAAAAAAGCTGTCAATTTCAGTAGAGGCTTTCCAACGGAAGATGTTGCTCCTCTTTCCGTTTACTCTACGGCAACTAAGTTGTTCTCTGAACTCGACGAGAGGATTCTTGCCAATGTGACGTGGAGTTTCGACCTTGATCCCGGTTTTGACTATCTTGTCCGGTTTCATTTCTGTGACATTGTTAGTACTTCTCTCGGATCACTTTTCTTCAGTATTTTTGTCAACTCGTGGCTGGTTGACCAACATGTCGATCTTAGTAATTTGACTTCAAATACACTTGGTGCTCCATATTTCATGGATGTAATAACAAAAGTAGATGATGTGGGAAAGCTAAATGTAAGTGTGGGACCGTCTCGGTTGGGTAATCCTTACCCGAACGCCATTCTTAATGGGTTAGAGATCATGAAACTAAGTGATTCTTTGAACAGTCTTGATGGATCGGATCATAGTTTGGCCTTGAAGAAAAAGATCTCCAAGATGAAAGTTGGTCTTATAATCAGTTTTTCGGTTGGAATAATTGTTGCATTTGTTATTGTTATTGCTTTGCTAGCCTTGTGCATAAGAAGGAGAAAGTTAGCATACATCGATAATGCTAATTGGCAAGAAGGTAAATTTTCGAAAAATGGAAAGGAAAGCAAGTACTCTATCTTTTCGAATCCAAACACGGGGTATCGTTTTCCGTTTTCCATGATTCAAGAGGCTACTGATAACTTTAGTGAAAGTTTGATTATCGGGGTAGGCGGATTTGGGAAGGTTTATAAGGGAGTTTTAAGAAACAGCACGCAAGTGGCAATTAAGAGGGGATCTTCGGAATCCAGGCAGGGTCATGTAGAGTTTTGGACCGAAATCGAAATGTTATCTCATTTCCGTCATAGGCATTTAGTATCTCTAATCGGGTATTGTGACGAAAGGAAGGAAATGATCATAATTTATGAGTACATGGAGAATGGTAGCCTTAGAAACCATTTGTACGGTTTGGATCTTCCGAGGTTAAGTTGGAGGCAAAGGCTCGAGATATGCATTGGATCGGCTAGAGGGATTCATTATCTTCATACCGGTTCGGCGAAAGCTGTTATTCATCGTGATGTAAAATCTGCAAACATTCTTCTAGATGAGAACTACATGGCTAAGGTTGCGGATTTCGGAATTTCGAAGGCATGCCCAGAAATTGACCAAACACATGTAAGCACAGCAGTGAAAGGGAGTTTCGGGTATTTAGATCCTGAGTATTTGACTAGACAGCAACTAACGGAAAAATCCGATGTGTACTCTTTTGGAGTGGTCTTGTTTGAAGTTGTTTGTGGTAGACCAGTTATTGACCCGTCTCTTCCTAGAGAACAGGTGAATTTGATTGAATGGGTTATGAAATGGAAGAGTAAGGACCGGTTAGAGGAGATTGTAGATCCCTTTCTTGAGGGGCAAGTAAAGTTAGGTTCGTTGAGGAAATTTGTGGAGATAGCCGATAAATGCTTGGCGGAATGTGGACTTGATCGGCCGGCGATGGGTGATGTTTTGTGGAATTTAGAGTGTGCATTTCAACTACATCAAGGGAATGAAAATCTGAATGATGTGGGCCCGTCTTCTTCTCGGGCGAGTGCGGTGAATCATTGGGAAAGCAGTGTGTCCCTCAGTACACAATCTAGCGTTGCAAGTGTAGATGGGGTTTCATTGAGTAAGGTGTTTGCTCAAATGGTGAGGGAAGATATGAGATAG 2478 41.2 MSFSDFHLLILFSSALSFFSFFSVSSGFNPEDSYLIDCGSLSYTTVGNRVFSSDETYSKFLLDEKPPIFINTSTLSNSSTPTLYSDLFKTARVLDTATSYSFPISKHGCHSIRLYFHPFSHKNYTLTTATFSVSAQNFTLLKDYRLQSGSVIKEYSLNITSDTLVLTFTPWNNNSIAFINALEVVSIPDNIFPVDVRTISRPGSNLNLQNRAVETAMRVNMGNVTVLPENDALSRLWIPDGMFLTHSNLVKFVSNKKAVNFSRGFPTEDVAPLSVYSTATKLFSELDERILANVTWSFDLDPGFDYLVRFHFCDIVSTSLGSLFFSIFVNSWLVDQHVDLSNLTSNTLGAPYFMDVITKVDDVGKLNVSVGPSRLGNPYPNAILNGLEIMKLSDSLNSLDGSDHSLALKKKISKMKVGLIISFSVGIIVAFVIVIALLALCIRRRKLAYIDNANWQEGKFSKNGKESKYSIFSNPNTGYRFPFSMIQEATDNFSESLIIGVGGFGKVYKGVLRNSTQVAIKRGSSESRQGHVEFWTEIEMLSHFRHRHLVSLIGYCDERKEMIIIYEYMENGSLRNHLYGLDLPRLSWRQRLEICIGSARGIHYLHTGSAKAVIHRDVKSANILLDENYMAKVADFGISKACPEIDQTHVSTAVKGSFGYLDPEYLTRQQLTEKSDVYSFGVVLFEVVCGRPVIDPSLPREQVNLIEWVMKWKSKDRLEEIVDPFLEGQVKLGSLRKFVEIADKCLAECGLDRPAMGDVLWNLECAFQLHQGNENLNDVGPSSSRASAVNHWESSVSLSTQSSVASVDGVSLSKVFAQMVREDMR 825
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1304876 1307662 + Conep05aG0032100.1 Cone5ag0310 437328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0310 825 Pfam Malectin-like domain 36 391 IPR024788 -
Cone5ag0310 825 FunFam Putative receptor-like protein kinase 33 188 - -
Cone5ag0310 825 FunFam Receptor-like protein kinase FERONIA 212 394 - -
Cone5ag0310 825 ProSiteProfiles Protein kinase domain profile. 493 767 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0310 825 PANTHER OS01G0750732 PROTEIN 398 795 IPR050885 -
Cone5ag0310 825 Gene3D Phosphorylase Kinase; domain 1 452 568 - -
Cone5ag0310 825 Pfam Protein tyrosine and serine/threonine kinase 499 691 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag0310 825 Gene3D Transferase(Phosphotransferase) domain 1 569 781 - -
Cone5ag0310 825 FunFam receptor-like protein kinase FERONIA 457 568 - -
Cone5ag0310 825 Gene3D - 31 187 - -
Cone5ag0310 825 Gene3D - 211 393 - -
Cone5ag0310 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 613 625 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag0310 825 SMART serkin_6 493 766 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0310 825 SUPERFAMILY Protein kinase-like (PK-like) 468 763 IPR011009 -
Cone5ag0310 825 CDD STKc_IRAK 499 764 - -
Cone5ag0310 825 ProSitePatterns Protein kinases ATP-binding region signature. 499 521 IPR017441 GO:0005524(InterPro)
Cone5ag0310 825 FunFam Receptor-like protein kinase FERONIA 569 784 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0310 Cone-Chr5:1304876 Cone6ag0119 Cone-Chr6:572346 7.51E-227 dispersed
Cone1ag1326 Cone-Chr1:56415284 Cone5ag0310 Cone-Chr5:1304876 0 wgd
Cone1ag0678 Cone-Chr1:6360381 Cone5ag0310 Cone-Chr5:1304876 1.14E-285 wgd
Cone5ag0310 Cone-Chr5:1304876 Cone5ag1186 Cone-Chr5:5339864 2.11E-280 wgd
Cone5ag0310 Cone-Chr5:1304876 Cone9ag1353 Cone-Chr9:10139305 6.56E-175 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82821 PF19088 TUTase 7.50E-13 CL0260 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0310 - - - 0.0