Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone5ag0328 | ATGGGGAAGAAAGGGAGTTGGTTTTCTGCACTGAAAAAAGCTCTCAAAACCGACTCTAAAGAAAAGAAAGATCCAAAATCAAAGAAAAAATGGTTCGCAAATGACAAGAGCGCCAACGACCTGATTTTCTTATCCGAACAAATCCCACCCGACGATACCCCGGGCCCACTTCCCACACCCGAACCCGAAAATGAACAAACCAATCATTCATCCTCTGAGGCGGCCTTAAGCGCCACTCAAGCTGCCTCGGAATTCATTCGCCTCACCTCCATTCCCCATTACTCCGGAAAATCAAGGGATGAACTCGCCACTATTATAATTCAGACAGCATTCCGTGGTTATATGGCGAGGAGGGCATTAAGGGCATTGATAGGATTGGTTCGGTTAAAATCGTTGATGCAAAGGCATTCCGTCAAACGACAAGTGAGCACAACGTTAAGATGTATGCAAACTCTTGTTCGTGTTCAGTCTCAGGTTCGGGCAAGGCGGATTAGAATGTCGGAAGAGAATCAGGCTCTTCATAGACAGCTCGAGCAGAACCGAGACGAGGAGTTTCAGAAGTCAAGAGCTGCTGTGGCTGGAGATTGGGATCTTAGTACGAAATCAAAGGCGCAAATCGAAGCAAAAATGGCGAAAAAGAAAGAAGCTGCTAAGAGAAGAGAAAGGGCGATGGCTTATGCATTCTCTCATCAGCAATCGTGGAAGGGTTCTTCAAAGTCTTCGAACCCGACATTCATGGACACGAACAATCCGCACTGGGGCTGGAGTTGGTTAGAGAGATGGATGGCAGATCGTCCATGGGAGACCGAAAGTATTATTGATTACTATGATCGCATGTCGGTCAAGAGCGCAGTAAGCCATGTCGTTTCTGTCAAGAGTAACACAAGGACTAATACTACTACTCCTCCTTCTAGCGGACTGAAATCGGGCCGGCCCAACGTGAAACCATTGAGCCTGACTGTGCCCCGGGGGGAGGATGACTCGAGGACCCTACAAAGTGTCAAGTCGGACCGGTACCGGAGGCGTAGCATTGGGGGGTCGTCGGTTAAGGACGATAATCTAAGCCTTGCGAGTTCGAGCACGGGACCGAAATACACGGGGCCCACAAAACTGGCCAGGAGGGCCCAGTTGCCAAGCCCGAAACGGAAAGAGAATAATGTGAAAGTGGAAAAGGGATTGATGGGGTCCGCCGGTTCGGCCAAGAAACGGCTGACATTTGCTGCTGCTCCGGGTCTGTCGAGGAGGCATTCGGGTCCTCCCAATATGCATACTTGGATAGAGAACTGA | 1287 | 49.65 | MGKKGSWFSALKKALKTDSKEKKDPKSKKKWFANDKSANDLIFLSEQIPPDDTPGPLPTPEPENEQTNHSSSEAALSATQAASEFIRLTSIPHYSGKSRDELATIIIQTAFRGYMARRALRALIGLVRLKSLMQRHSVKRQVSTTLRCMQTLVRVQSQVRARRIRMSEENQALHRQLEQNRDEEFQKSRAAVAGDWDLSTKSKAQIEAKMAKKKEAAKRRERAMAYAFSHQQSWKGSSKSSNPTFMDTNNPHWGWSWLERWMADRPWETESIIDYYDRMSVKSAVSHVVSVKSNTRTNTTTPPSSGLKSGRPNVKPLSLTVPRGEDDSRTLQSVKSDRYRRRSIGGSSVKDDNLSLASSSTGPKYTGPTKLARRAQLPSPKRKENNVKVEKGLMGSAGSAKKRLTFAAAPGLSRRHSGPPNMHTWIEN | 428 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 1384439 | 1386680 | - | Conep05aG0033900.1 | Cone5ag0328 | 437346 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone5ag0328 | 428 | Coils | Coil | 163 | 183 | - | - | |
| Cone5ag0328 | 428 | Pfam | IQ calmodulin-binding motif | 103 | 121 | IPR000048 | GO:0005515(InterPro) | |
| Cone5ag0328 | 428 | Coils | Coil | 203 | 223 | - | - | |
| Cone5ag0328 | 428 | MobiDBLite | consensus disorder prediction | 348 | 366 | - | - | |
| Cone5ag0328 | 428 | MobiDBLite | consensus disorder prediction | 328 | 347 | - | - | |
| Cone5ag0328 | 428 | MobiDBLite | consensus disorder prediction | 14 | 35 | - | - | |
| Cone5ag0328 | 428 | SMART | iq_5 | 99 | 121 | IPR000048 | GO:0005515(InterPro) | |
| Cone5ag0328 | 428 | MobiDBLite | consensus disorder prediction | 292 | 308 | - | - | |
| Cone5ag0328 | 428 | MobiDBLite | consensus disorder prediction | 62 | 76 | - | - | |
| Cone5ag0328 | 428 | ProSiteProfiles | IQ motif profile. | 100 | 128 | - | - | |
| Cone5ag0328 | 428 | PANTHER | IQ-DOMAIN 5-RELATED | 4 | 378 | - | - | |
| Cone5ag0328 | 428 | MobiDBLite | consensus disorder prediction | 292 | 386 | - | - | |
| Cone5ag0328 | 428 | MobiDBLite | consensus disorder prediction | 14 | 76 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0985 | Cone-Chr1:54935358 | Cone5ag0328 | Cone-Chr5:1384439 | 7.03E-14 | dispersed | |
| Cone5ag0328 | Cone-Chr5:1384439 | Cone5ag1312 | Cone-Chr5:7581605 | 3.13E-26 | dispersed | |
| Cone13ag1287 | Cone-Chr13:9640477 | Cone5ag0328 | Cone-Chr5:1384439 | 3.01E-82 | wgd | |
| Cone18ag0502 | Cone-Chr18:2449046 | Cone5ag0328 | Cone-Chr5:1384439 | 2.71E-106 | wgd | |
| Cone19ag1272 | Cone-Chr19:8667105 | Cone5ag0328 | Cone-Chr5:1384439 | 4.33E-83 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone5ag0328 | - | - | - | 0.0 |