Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0367 ATGACATTTTCCATCCGAAACGGCTCCATGCAGTGGGCTGACATGAGACACCTAACCCACCAAACACTAACCGGTCGGTGGTTCATGGTCTTTGCCTCAATCCTAATCATGTCCACTGCCGGTGCAACCTACATGTTCAGCCTCTACTCCAAAGACATTAAGTCCGTCCTCGGATATGACCAAACAACTCTCAATCTCCTCAGCTTCTCCAAGGACCTTGGAAGCAATGTCGGAATACTTGCCGGCCTAATCAACGAGGTCACTCCTCCATGGGTCGTGCTCTCAATAGGTGCAAACTCTCAATCTTTTACCAACACAGGGTCATTAGTCACATGCGTTAAAAACTTCCCAGAAAGCCGGGGTGTCGTGATCGGAATCTTGAAAGGGTATGTCGGATTAAGTGGTGCGATAATTACACAATTGTATCATGCTTTCTATGGCAACGATACTAAGTCTTTGATCTTGCTAATTGGCTGGCTCCCTGCTGCTATTTCCTTTGCATTTTTACGTACCATTAGGATCATCAAAATTACCAAACACCCCAATGAGCTTAGAGTCTTTTACAACTTCCTCTACATCTCTCTGGGGCTTGCTGGGTTCTTAATGATGATGATTATTATTCAGAAAAATATAAAATTTTCTCAAGGCGAGTACGTTGGTAGTGCAGTCGCAGTGCTTCTCTTACTCTTTCTCCCTCTCCTTGTCGTTATATTGGAAGAATACAATCTTTCGTTGACCAAAAACTCGTTGCCTTTCTCTACAACAAGTACTAGTACTACTTTTTCTCAGGAACCAAACATAGAATTACTTACGAAACAAGAAAGATTATCTAGATCATGCTGGAAAACTGTTTTCAATCCACCAGAAAGAGGCGAGGACTACACAATTCTGCAAGCACTTTTCAGCATCGACATGTTGATATTATTCGTCACAGCAATGTGTGGAGTAGGCGGGACCCTCACTGCAATAGACAATCTTGGCCAAATCGGAGCGTCTTTAGGGTATCCTACCACAAGCACAAGCACGTTCGTTTCACTCGTAAGCATATGGAACTACCTCGGACGAGTCGTCGCTGGGTTTGTGTCGGAAATTTTCTTGATAAAATACAACTTCCCACGTCCTCTCATGCTCACGCTAACACTCTTTCTATCATGCCTGGGCCATCTCCTGATTGCGTTCGACGTAGCCAATGGACTTTATGTAGCGTCGATAGTGATCGGGTTTTGTTTCGGGGCCCAGTGGCCGCTAGTCTTCGCCATAATATCCGAGCTTTTCGGGCTCAAGTATTACTCCACGTTGATGAATTTTGGCTCGGTGGCGAGTCCGGTTGGGCTGTACGTGCTAAACGTGAAGGTGGCCGGTCATTTGTACGACAAGGAAGCGACGAGGCAGATGGAGGGTTTAGGGCTTAAGAGAAAGGAAGGGGAGGAGTTGAATTGTATTGGGGTGGAGTGTTTTAAGCTGTCGTTTATTGTAATAACTTGTGTCACTCTTTTGGGTGCTTTTGTTTCGCTTGTTTTGGTGATTAGGACGAGGATGTTTTACAAGGGTGACATTTATAAGAGGTTTAAACAGGAGGAGGTTGATTCGGCCAGGCCAGCTCAGACCCAGACCAGCCAGATGGCACTGCATCATGAAAACGGCGTCGTTGGATAA 1656 45.41 MTFSIRNGSMQWADMRHLTHQTLTGRWFMVFASILIMSTAGATYMFSLYSKDIKSVLGYDQTTLNLLSFSKDLGSNVGILAGLINEVTPPWVVLSIGANSQSFTNTGSLVTCVKNFPESRGVVIGILKGYVGLSGAIITQLYHAFYGNDTKSLILLIGWLPAAISFAFLRTIRIIKITKHPNELRVFYNFLYISLGLAGFLMMMIIIQKNIKFSQGEYVGSAVAVLLLLFLPLLVVILEEYNLSLTKNSLPFSTTSTSTTFSQEPNIELLTKQERLSRSCWKTVFNPPERGEDYTILQALFSIDMLILFVTAMCGVGGTLTAIDNLGQIGASLGYPTTSTSTFVSLVSIWNYLGRVVAGFVSEIFLIKYNFPRPLMLTLTLFLSCLGHLLIAFDVANGLYVASIVIGFCFGAQWPLVFAIISELFGLKYYSTLMNFGSVASPVGLYVLNVKVAGHLYDKEATRQMEGLGLKRKEGEELNCIGVECFKLSFIVITCVTLLGAFVSLVLVIRTRMFYKGDIYKRFKQEEVDSARPAQTQTSQMALHHENGVVG 551
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1562366 1564362 + Conep05aG0038100.1 Cone5ag0367 437385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0367 551 Pfam Nodulin-like 91 237 IPR010658 -
Cone5ag0367 551 CDD MFS_Mch1p_like 25 501 - -
Cone5ag0367 551 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 98 - GO:0016020(PANTHER)
Cone5ag0367 551 SUPERFAMILY MFS general substrate transporter 22 513 IPR036259 -
Cone5ag0367 551 Gene3D MFS general substrate transporter like domains 297 513 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0367 Cone-Chr5:1562366 Cone5ag0368 Cone-Chr5:1564676 1.01E-236 tandem
Cone1ag1376 Cone-Chr1:56654358 Cone5ag0367 Cone-Chr5:1562366 5.34E-239 wgd
Cone11ag1323 Cone-Chr11:9748372 Cone5ag0367 Cone-Chr5:1562366 6.14E-206 wgd
Cone11ag1038 Cone-Chr11:8211021 Cone5ag0367 Cone-Chr5:1562366 1.20E-237 wgd
Cone13ag1248 Cone-Chr13:9498851 Cone5ag0367 Cone-Chr5:1562366 3.62E-226 wgd
Cone18ag0537 Cone-Chr18:2651571 Cone5ag0367 Cone-Chr5:1562366 1.04E-90 wgd
Cone18ag0250 Cone-Chr18:1225841 Cone5ag0367 Cone-Chr5:1562366 5.18E-11 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0367 - - - 0.0