Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0368 ATGGAGGTTCCCAAATTGGGGCGGTCCAACATGAGGAGCTTCGCGCTCCAACTAATCTCCGGTTCATGGTTCATGATGTTTGCTTCCTTTCTCATCATGTCCATGGCCGGAATCCCGTACATGTTCGGCCTCTACTCCGGCACCCTTAAATCCGTCCTCGGATACGACCAAACTACCCTCAACTTCATCAGTTTCTTTAAAGACGTTGGAACTACTGTCGGAATCCTTGCCGGACTAATCAACGAGGTGACACCTCCGTGGGCCGTACTCGCCATGGGTGCGGGCCTCAATTTCTTCGGCTACTTCATGATCTATCTCTCTGTCACTCAAAAACTCCCCAAACCTCATGTCTGGCTCATGTGCTTGTACATCTGCGTTGGAGCAAACGCTACAACGTTTGCCAACACAGGTGCGCTTGTCACGTGCGTTAAAAACTACCCAGAAAAACGTGGAGTCGTTATAGGGATTCTGAAGGGGTATATAGGATTGAGTGGAGCTATTGTTACTCAACTTTACCATGCAATTTATGGAAACGATGCTAAGTCTTTGCTGTTGCTGTTAGGCTGGCTCCCCGCCGTTATTTCTTTTGTTTTTCTTCCTACAGTTCGAAGCCTTAAGGTTAACCATCAGCCCAATGAGCTTAAAGTTTTCTTCAACTTCCTTTACATCTCACTTGGTCTAGCTAGCTTTCTCATGATCATGATCATTTTCCAACAAAAGTTTGATTTTACCCACAGTGAATACAGTGGCAGTGCGGCTTTAACAGTGTTTTTACTTCTCCTGCCGATTGTTATAGTTTTCGGTGAAGAATTCAAGCTCTGGAAAAACAAGGTTCTAGCTTTGAACGATCCTTCACCGATCAAAATCACAACTACTTCTCCTTCTACTGAAATAGTAGAATCTTCTACACCTCGATCAACAGCAATTATTACTAATCATAAGAGACAAGATTTATGGTGGGAAAATGTATTCAATCCTCCGAAAAGGGGAGAGGATTTCACTATACTTCAAGCACTTTTCAGCATCGACATGTTCATCCTTTTCATCGCCACGGCATGTGGGGTTGGTGGTACCTTAACAGCCATTGACAATCTCGGTCAAATCGGCGCTTCTCAAGATTACCCGAAAAGAAGCATAAGCACGTTCGTTTCATTAGTAAGCATATGGAACTACCTAGGCCGGGTTTTCTCCGGTTTTGCCTCAGAAATTCTCCTCACCAAATACAAGTTCCCTCGCCCTCTCATGCTCACTCTAGTCCTCCTCTTATCATGTGCGGGCCATCTTCTTATAGCCTTTAACCCACCCGGAGCTCTCTACGTCGCTTCTATCATTACCGGATTTTGTTACGGTGCCCAATGGCCTCTACTTTTCTCGATAGTTTCCGAGCTCTTCGGGCTTAAGTATTACGCGACGTTGTATAATTTCGGGTCAGTGGCCAGTCCAGTCGGGTTATATGTATTGAACGTGAATGTTGCTGGACATTTGTATGATAAGGAGGCTAAGAAGCAGTTAGCAGCTTTCGGGCTTGTTAGAAAAGCAGGAGAGGAGTTGAATTGCAGTGGGGTGGTGTGCTTTAAGTTGTCATTTATTATTATTACCGCCGTAACTTTTTTTGGTATGATAGCTTCTTTGATCTTGGTTTTGAGGACTAGGATGTTTTACCGGAGTGATATCTATAAGAAGTTCAGAGAAGAAGAGGGGGGTGATCAGAAGAATGTTGAATTACAAGGTAACGGAGTTGTTCCTTTGGATTCGAAATATGGACAAAAACAATAG 1776 44.2 MEVPKLGRSNMRSFALQLISGSWFMMFASFLIMSMAGIPYMFGLYSGTLKSVLGYDQTTLNFISFFKDVGTTVGILAGLINEVTPPWAVLAMGAGLNFFGYFMIYLSVTQKLPKPHVWLMCLYICVGANATTFANTGALVTCVKNYPEKRGVVIGILKGYIGLSGAIVTQLYHAIYGNDAKSLLLLLGWLPAVISFVFLPTVRSLKVNHQPNELKVFFNFLYISLGLASFLMIMIIFQQKFDFTHSEYSGSAALTVFLLLLPIVIVFGEEFKLWKNKVLALNDPSPIKITTTSPSTEIVESSTPRSTAIITNHKRQDLWWENVFNPPKRGEDFTILQALFSIDMFILFIATACGVGGTLTAIDNLGQIGASQDYPKRSISTFVSLVSIWNYLGRVFSGFASEILLTKYKFPRPLMLTLVLLLSCAGHLLIAFNPPGALYVASIITGFCYGAQWPLLFSIVSELFGLKYYATLYNFGSVASPVGLYVLNVNVAGHLYDKEAKKQLAAFGLVRKAGEELNCSGVVCFKLSFIIITAVTFFGMIASLILVLRTRMFYRSDIYKKFREEEGGDQKNVELQGNGVVPLDSKYGQKQ 591
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1564676 1566640 + Conep05aG0038200.1 Cone5ag0368 437386
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0368 591 SUPERFAMILY MFS general substrate transporter 24 552 IPR036259 -
Cone5ag0368 591 Gene3D MFS general substrate transporter like domains 341 552 IPR036259 -
Cone5ag0368 591 MobiDBLite consensus disorder prediction 570 591 - -
Cone5ag0368 591 Pfam Nodulin-like 23 267 IPR010658 -
Cone5ag0368 591 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 22 563 - GO:0016020(PANTHER)
Cone5ag0368 591 CDD MFS_Mch1p_like 23 540 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag1038 Cone-Chr11:8211021 Cone5ag0368 Cone-Chr5:1564676 1.18E-288 dispersed
Cone11ag1323 Cone-Chr11:9748372 Cone5ag0368 Cone-Chr5:1564676 4.25E-226 dispersed
Cone13ag1248 Cone-Chr13:9498851 Cone5ag0368 Cone-Chr5:1564676 3.80E-243 dispersed
Cone18ag0250 Cone-Chr18:1225841 Cone5ag0368 Cone-Chr5:1564676 8.11E-12 dispersed
Cone18ag0251 Cone-Chr18:1226489 Cone5ag0368 Cone-Chr5:1564676 4.84E-51 dispersed
Cone18ag0252 Cone-Chr18:1227055 Cone5ag0368 Cone-Chr5:1564676 1.12E-25 dispersed
Cone18ag0537 Cone-Chr18:2651571 Cone5ag0368 Cone-Chr5:1564676 3.45E-95 dispersed
Cone1ag1376 Cone-Chr1:56654358 Cone5ag0368 Cone-Chr5:1564676 0 dispersed
Cone2ag0869 Cone-Chr2:34642511 Cone5ag0368 Cone-Chr5:1564676 4.87E-100 dispersed
Cone5ag0367 Cone-Chr5:1562366 Cone5ag0368 Cone-Chr5:1564676 1.01E-236 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0368 - - - 0.0