Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone5ag0394 | ATGGCTTCGCTTATGAGCACTTTCTCATCTTCTTCACTCTCCTCTTACTACCACCTTATTTTCACCTTCTTAGCCTTTTTCATCTCGGGTTTTATTTTCTTGTTCACCAAGAAAGCCAAATCCAAGGGCTTGAATCTCCCTCCTGGCCCTCCTGGTTGGCCCATTGTTGGAAATCTCTTCCAAGTAGCTCGCTCTGGTAAACCGTTTTTCCAATACGTCGATGAGCTTCGTAAGATTTATGGCCCAATCTTCACTCTCAAAATGGGCACTCGAACAATGATCATCTTAAGCGACGCCAGTCTGGTCCATGAAGCTCTGATTAAAAAAGGTGCAATCTTTGCTAGCCGGCCTAGAGAAACTCCGACGAGAACGATCTTCAGCAGCAATAAATTCTCCGTAAATGCCTCCCTTTACGGCCCGCTATGGCGTTCTCTCCGCCGCAACATGGTGGAGAACATGCTCAGCTCGAGCCGGCTCAAAGAGTTTCGCGACGTCAGAAACAACGCGATGGAGACTCTTATCAGGCGCATCAAAGCTGACGCTGACGCTAACAACGACGTCGTTTGGGTGTTGAAAAACGCGCGTTTCGCTGTGTTCTGTATTCTGTTAGCCATGTGTTTTGGGCTCGAAATGGATGAATTAACCGTCGTGAAAATGGACGACGTTCTGAAAACCGTTTTGATCGTACTCGACCCACGAATCGACGATTATCTTCCGATTCTCAGCCCCTTCTTCTCCAAACAGAGAAAACGAGCTCTAGAAGTTAGAAACGAACAGATCGAATTCGTCGTTCAGTTTATCAACAGGCGTAGAAGAGCACTAGCAAATCCTGGTTCTGACAGCATTGCGACGTCGTTTTCATACCTGGACACACTCTTCGATCTCAAAGTCGAAGGACGAAAATCTACGCCAACAGACGCGGAATTAGTCACGCTCTGTTCTGAATTTCTCAACGGCGGCACAGACACCACTGCAACCGCGCTCGAATGGGGGATCGCGGAGCTCATCGTAAATCCAGGAGTTCAGGAAAAACTCTACAACGAAATAAAATCAACTGTCGGCGATAAGAAAGTGGATGAGAAAGACGTTGAGAAAATGCCTTATTTGCAAGCTGTAGTCAAAGAGCTGCTTCGGAAGCATCCTCCAACTTATTTTTCGCTGACGCACGCGGTGACAGAGAGTACTAAACTCGCCGGTTATGATATTCCGACGGAAACGAACGTGGAGATCTTCCTTCCTCCGATCGGACAAGATCCGAATCTGTGGAAGAATGCGGAGAAGTTTGATCCGGAGAGGTTTCTGTCCGGTGAGGAATATGCGGATATTACGGGAGTAACAGCTGTTAAAATGATGCCGTTTGGAGTTGGAAGAAGGATCTGCCCTGGATTGGGAATGGCGACGGTACATGTTCATCTAATGCTAGCGAGAATGGTGCAGGAATTCGAGTGGAGTGCTTTTCCAGAAGATGGTAAGATTGATTTTACAGGGAAGCTGGAGTTCACTGTGGTGATGAAGAATCCTCTTAGAGCTAAGGTTAAGCCTAGGGTTTAA | 1551 | 47.13 | MASLMSTFSSSSLSSYYHLIFTFLAFFISGFIFLFTKKAKSKGLNLPPGPPGWPIVGNLFQVARSGKPFFQYVDELRKIYGPIFTLKMGTRTMIILSDASLVHEALIKKGAIFASRPRETPTRTIFSSNKFSVNASLYGPLWRSLRRNMVENMLSSSRLKEFRDVRNNAMETLIRRIKADADANNDVVWVLKNARFAVFCILLAMCFGLEMDELTVVKMDDVLKTVLIVLDPRIDDYLPILSPFFSKQRKRALEVRNEQIEFVVQFINRRRRALANPGSDSIATSFSYLDTLFDLKVEGRKSTPTDAELVTLCSEFLNGGTDTTATALEWGIAELIVNPGVQEKLYNEIKSTVGDKKVDEKDVEKMPYLQAVVKELLRKHPPTYFSLTHAVTESTKLAGYDIPTETNVEIFLPPIGQDPNLWKNAEKFDPERFLSGEEYADITGVTAVKMMPFGVGRRICPGLGMATVHVHLMLARMVQEFEWSAFPEDGKIDFTGKLEFTVVMKNPLRAKVKPRV | 516 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 1690467 | 1692484 | + | Conep05aG0040900.1 | Cone5ag0394 | 437412 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone5ag0394 | 516 | Gene3D | Cytochrome P450 | 38 | 516 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | E-class P450 group I signature | 328 | 354 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | E-class P450 group I signature | 370 | 388 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | E-class P450 group I signature | 450 | 460 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | E-class P450 group I signature | 77 | 96 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | E-class P450 group I signature | 460 | 483 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | E-class P450 group I signature | 308 | 325 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | E-class P450 group I signature | 411 | 435 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | E-class P450 group I signature | 101 | 122 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | P450 superfamily signature | 319 | 336 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | P450 superfamily signature | 451 | 460 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | P450 superfamily signature | 371 | 382 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | PRINTS | P450 superfamily signature | 460 | 471 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 453 | 462 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| Cone5ag0394 | 516 | PANTHER | FLAVONOID 3'-MONOOXYGENASE-RELATED | 28 | 515 | IPR051103 | GO:0016020(PANTHER)|GO:0016709(PANTHER) | |
| Cone5ag0394 | 516 | CDD | CYP77_89 | 79 | 509 | - | - | |
| Cone5ag0394 | 516 | SUPERFAMILY | Cytochrome P450 | 47 | 515 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| Cone5ag0394 | 516 | FunFam | Cytochrome P450 family protein | 40 | 516 | - | - | |
| Cone5ag0394 | 516 | Pfam | Cytochrome P450 | 47 | 511 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag0003 | Cone-Chr1:58932 | Cone5ag0394 | Cone-Chr5:1690467 | 1.30E-146 | dispersed | |
| Cone2ag0385 | Cone-Chr2:2030918 | Cone5ag0394 | Cone-Chr5:1690467 | 1.10E-95 | dispersed | |
| Cone5ag0394 | Cone-Chr5:1690467 | Cone12ag0150 | Cone-Chr12:770894 | 7.35E-66 | dispersed | |
| Cone1ag1404 | Cone-Chr1:56772292 | Cone5ag0394 | Cone-Chr5:1690467 | 0 | wgd | |
| Cone13ag1219 | Cone-Chr13:9392057 | Cone5ag0394 | Cone-Chr5:1690467 | 8.92E-53 | wgd | |
| Cone19ag1205 | Cone-Chr19:8413747 | Cone5ag0394 | Cone-Chr5:1690467 | 1.74E-58 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone5ag0394 | K21995 | - | mdm:103410051 | 823.157 |