Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0416 ATGGGATTAGACGCAGTAATGGGCGATGATTTTCTGAAAGAGAGAGCGAGGATGATGAGAGAATCACTTCAAAAGAGCGAAACCATTACCGAAAACGTCGTCTCCATCCTAGGCTCCTTTGACCACCGCCTCTCCGCCCTTGAAACCGCTATGCGGCCCACTCAGATTAGAACTCATTCTATTCGGAATGCTCACGAAAATATCGACAAGACTATGAAAGCTGCCGATGTTATATTGGCTCAATTCGATCTTTCTCGTCAGGCAGAAGTGAAAATACTGAAGGGACCCAATGAGAACTTAGAGAGTTATCTAGAAGCAATTGGTCAGCTGAGAAGTAATATTCAGTTCTTTAGCAGCAACAAAGGGTTTAGAAGTAGCGAGGCAGTGATTAATCATGTGAATAGTTTGCTCAGTAAAGCTATTTTAAAGCTTGAAGACCAGTTTAAACAGCTCTTTTCATCTTACAGCAAACCTGTGGAGCCAGAACGTCTTTTCGAGTGCCTTCCAAATTCTCTTCGACCATCTTCCGATTCTTCTGGTCAACCGGGGGATTCAAAGTATCCTCCATCAAATAGACATTCTGAACAAGAAAATAGCTTAGAAACTGCCGTTTTTACGCCTCCCACTCTTATCCCACCAAGGGTCCTACCACTTCTCCATGATTTGGCGCAACAGATGATTCAGGCTGGTCACCAACAGCAATTACTCAAAATTTACAGGGATACTCGATCTGTGGTTTTGGAAGAAAGTCTTCGAAAATTGGGTGTTGAAAAATTAAGCAAAGAGGATGTTCAAAAGATGCAATGGGAGGTTTTAGAGGCCAAGATTGGGAACTGGATTCATTTCATGCGAATTGCGGTAAAACTTCTTTTTGCCGGAGAAAGAAAAGTTTGCGATCAAATATTGGAAGGCTTTGGTTCTCTTAGAGATCAGAGCTTTGCTGAGGTTACTACAAGTAGTGTCTCAGTTCTATTCAGTTTTGGAGATGCAATCGCTAAAAGCAAGAGGTCACCCGAAAAGTTATTTGTGCTTTTGGACATGTATGAAATAATGCAAGAGCTTCACTCAGAGATTGAGACAATTTTCAAGGGGAAAGCTTGCAATGAAATTACAGCATCTGCATTGGGTTTGACTAGACAGCTTGCCAAGACAGCTGAAGAGACATTTGGGGATTTTGAGGAAGCTGTTGAAAAAGATGCAACGAAGACAGCTGTTTTGGATGGAACGGTCCATCCTCTAACTAGCTATGTGATTAACTATGTGAAGTTCCTTTTCGACTATCAGTCAACCTTGAAACAACTTTTCCAAGACTTGGAAAATGGAGATCAAACGGTCTCACAATTAGCAACTGTTACAATGAATATAATGCAGGCACTTCAAGCCAATTTGGATGGCAAATCTAAACAGTACAGAGATCCTGCCTTGACACACTTATTCCTCATGAACAACATTCACTATATTGTCAGATCTGTTCGTAGGTCAGAAGCCAAGGACTTATTAGGGGATGATTGGGTTCAGAGACACAGAAGAATTGTACAGCAACATGCAAATCAGTACAAGAGAAATGCTTGGGGAAAGATTTTGCAATGCCTCATTATCCAAGGTCTGAGCTCATCTGGCGCTGGTAGTGGGACAGGTGGAGATGGAGGGAGTAGTGGAGCCTCAAGAGCGGTTGTTAAAGAGAGGTTTAAGACATTCAATACGCAATTTGAGGAACTTCATCAAAAACAATCTCAATGGACCGTCCCTGATACTGAATTGCGTGAATCTCTTAGACTTGCTGTTGCAGAAGTCTTGTTGCCTGCATACCGAAATTTTCTAAAACGTTATGGGCCTTTAGTTGACAATGTAAAGAACACCCAGAAGTATATTAGGTATCAACCAGAGGATCTTGAAAGAATGTTGGGTGAATTTTTTGAGGGGAAGAATGTGAATGAAACCAAGAGGTAA 1950 41.64 MGLDAVMGDDFLKERARMMRESLQKSETITENVVSILGSFDHRLSALETAMRPTQIRTHSIRNAHENIDKTMKAADVILAQFDLSRQAEVKILKGPNENLESYLEAIGQLRSNIQFFSSNKGFRSSEAVINHVNSLLSKAILKLEDQFKQLFSSYSKPVEPERLFECLPNSLRPSSDSSGQPGDSKYPPSNRHSEQENSLETAVFTPPTLIPPRVLPLLHDLAQQMIQAGHQQQLLKIYRDTRSVVLEESLRKLGVEKLSKEDVQKMQWEVLEAKIGNWIHFMRIAVKLLFAGERKVCDQILEGFGSLRDQSFAEVTTSSVSVLFSFGDAIAKSKRSPEKLFVLLDMYEIMQELHSEIETIFKGKACNEITASALGLTRQLAKTAEETFGDFEEAVEKDATKTAVLDGTVHPLTSYVINYVKFLFDYQSTLKQLFQDLENGDQTVSQLATVTMNIMQALQANLDGKSKQYRDPALTHLFLMNNIHYIVRSVRRSEAKDLLGDDWVQRHRRIVQQHANQYKRNAWGKILQCLIIQGLSSSGAGSGTGGDGGSSGASRAVVKERFKTFNTQFEELHQKQSQWTVPDTELRESLRLAVAEVLLPAYRNFLKRYGPLVDNVKNTQKYIRYQPEDLERMLGEFFEGKNVNETKR 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1766096 1769902 + Conep05aG0043200.1 Cone5ag0416 437434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0416 649 MobiDBLite consensus disorder prediction 171 199 - -
Cone5ag0416 649 PANTHER EXOCYST COMPLEX PROTEIN EXO70 14 642 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cone5ag0416 649 Pfam Exo70 exocyst complex subunit C-terminal 278 636 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cone5ag0416 649 Pfam Exocyst complex component Exo70 N-terminal 71 151 - -
Cone5ag0416 649 Gene3D Exocyst complex component Exo70 76 649 - -
Cone5ag0416 649 SUPERFAMILY Cullin repeat-like 78 640 IPR016159 -
Cone5ag0416 649 MobiDBLite consensus disorder prediction 170 199 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0966 Cone-Chr11:7837112 Cone5ag0416 Cone-Chr5:1766096 0 dispersed
Cone20ag0630 Cone-Chr20:3788807 Cone5ag0416 Cone-Chr5:1766096 2.06E-69 dispersed
Cone20ag1348 Cone-Chr20:8666061 Cone5ag0416 Cone-Chr5:1766096 9.76E-108 dispersed
Cone5ag0416 Cone-Chr5:1766096 Cone5ag1050 Cone-Chr5:4612611 1.13E-101 dispersed
Cone1ag1422 Cone-Chr1:56849045 Cone5ag0416 Cone-Chr5:1766096 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0416 K07195 - csv:101206262 1015.76