Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0446 ATGAGCTCGATGGGAATTTTCGAAGAGATGGGCTTTTGTGGTAACCTAGATTTTCTTTCTGCCCTTCCTGGGGAACCGGAGGCTGCACCAGAGCATGAACCCGAGGCAATGGGAGACGAGGATTATAGTGACGAAGAGGTTGATGTTGACGAGCTTGAGAGGAGGATGTGGAGAGACCGAATGCTATTGAAGCACCTCAAAGAACAAAACAAGGGAAAAGAAGCGGACGACAATACAAAGCGGCTTCAGTCCCAAGAGCAAGCCCGGAGAAAGAAGATGTCAAGAGCACAAGATGGTATTCTCAAATACATGTTGAAAATGATGGAGGTCTGTAAAGCTCAGGGTTTTGTTTATGGGATCATTCCCGAGAAAGGAAAACCGGTTAGTGGAGCCTCTGACAATCTCCGTGCATGGTGGAAAGAGAAAGTTAGATTTGACCGTAACGGCCCTGCAGCAATTTCCAAGTATCAGGCTGATCATTCAATTCCAGGCAAGAACGAGGATTGCAGTGCTGTAACATCTGCTCACACTTTACAGGAGCTTCAAGACACCACTCTTGGGTCACTATTATCTGCTCTGATGCAGCATTGTGATCCGCCCCAGAGGCGGTTCCCACTAGATAAGGGTGTTGCTCCGCCGTGGTGGCCCACAGGGAATGAGTGCTGGTGGTCGGAGTTGGGTTTACCCAAGGAAGGGCCTCCGCCTTACAAGAAGCCTCATGATCTGAAAAAGGCCTGGAAGGTTAGTGTTCTCACAGCAGTGATTAAGCACATGTCCCCTGACATTGCCAAGATCCGTAAACTTGTCCGCCAGTCTAAATGCTTGCAGGACAAAATGACTGCCAAGGAGAGTGCTACTTGGCTTGCCATTGTAAACCAGGAAGAAGCTCTGGCCCGAAAGTTGTATCCTGATAGATGTCCACCTGTAATGGCTGGTGGGAGTGGATCCCTTGTGATCAATGATACAAGTGATTATGATGTGGAAGGAGTGGATGATCCGATGGTTGATGTAGATGAATGCAAGCCTTGTGATATCAATGTCAATATTTTCAATGTTGGAGCTTCTGGACCGAGAGATAGTAATAATAATAATAACAATAATAATAGGCTTATGATACCAACAATGGCTACTCAGATTAAGGGAGACCTAATGGGAATTGTCTCGAATTTCACACCGAAGCGGAAACAGCTGGCTGAAGAAGAAGAAGTTCTGGTGGATCAGAAACTATATCCTTGTGAGTTTTCTAGATGTCCGTATAGTGATCTAAGGCTTGCATTTCTTGACAGGACTGCGAGAAACAATCACCAAATGACTTGTCCATATAGGAGCTATTCTTCTCCCCAGATGGCTCGCGGAATGTCAAACTTCCAATTAAACAATGAGAAAGCTCCTGTCTTTTCTCAACCCTTTGCTCCACCACCTATTAAGCCAGGCACTCCACCTGTTATAAACCAAAGCTCTCCTTTCAGTGACAATGATGGGCAGAGGATGATTTCCGAGCTCTTCACATTTTATGATTCTAATCTACAGGGCAACAAGCTTCTACACCCTGGGAACCTCAATGTTGAGCAGCAGCAACAAATCCAGCTTCAGGGGGATAACAACTTTTATGGCCAAAGTTATATAATGGAAAGCAGCAAATCATCTGAAGAGACAAGTACTCAGATGCATCAAACAGGCTTTCCATCCATGAATATGCAGTTTGATTCACCCTTTCCTATCAATCCGAACGAAAATATAGCTGGCTTGTGTTTCGGTCCTCCATATTCAGGAGATCAACTGCCAAAGCAAGAAACATCGCTGGGGTATCTTTGA 1815 45.45 MSSMGIFEEMGFCGNLDFLSALPGEPEAAPEHEPEAMGDEDYSDEEVDVDELERRMWRDRMLLKHLKEQNKGKEADDNTKRLQSQEQARRKKMSRAQDGILKYMLKMMEVCKAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAISKYQADHSIPGKNEDCSAVTSAHTLQELQDTTLGSLLSALMQHCDPPQRRFPLDKGVAPPWWPTGNECWWSELGLPKEGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIAKIRKLVRQSKCLQDKMTAKESATWLAIVNQEEALARKLYPDRCPPVMAGGSGSLVINDTSDYDVEGVDDPMVDVDECKPCDINVNIFNVGASGPRDSNNNNNNNNRLMIPTMATQIKGDLMGIVSNFTPKRKQLAEEEEVLVDQKLYPCEFSRCPYSDLRLAFLDRTARNNHQMTCPYRSYSSPQMARGMSNFQLNNEKAPVFSQPFAPPPIKPGTPPVINQSSPFSDNDGQRMISELFTFYDSNLQGNKLLHPGNLNVEQQQQIQLQGDNNFYGQSYIMESSKSSEETSTQMHQTGFPSMNMQFDSPFPINPNENIAGLCFGPPYSGDQLPKQETSLGYL 604
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1893514 1897064 - Conep05aG0046400.1 Cone5ag0446 437464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0446 604 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 6 559 IPR006957 GO:0003677(PANTHER)|GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(InterPro)
Cone5ag0446 604 MobiDBLite consensus disorder prediction 22 45 - -
Cone5ag0446 604 Pfam Ethylene insensitive 3, DNA-binding domain 50 295 IPR047091 GO:0003700(InterPro)
Cone5ag0446 604 SUPERFAMILY DNA-binding domain of EIN3-like 175 298 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone5ag0446 604 Gene3D - 83 163 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone5ag0446 604 Gene3D - 168 306 IPR023278 GO:0003700(InterPro)|GO:0005634(InterPro)
Cone5ag0446 604 FunFam Ethylene insensitive 3-like 1 82 160 - -
Cone5ag0446 604 Coils Coil 49 69 - -
Cone5ag0446 604 MobiDBLite consensus disorder prediction 68 94 - -
Cone5ag0446 604 FunFam Ethylene insensitive 3-like 1 169 305 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone11ag0985 Cone-Chr11:7920393 Cone5ag0446 Cone-Chr5:1893514 2.87E-198 dispersed
Cone11ag1473 Cone-Chr11:10471156 Cone5ag0446 Cone-Chr5:1893514 7.50E-114 dispersed
Cone11ag1551 Cone-Chr11:10818602 Cone5ag0446 Cone-Chr5:1893514 2.95E-231 dispersed
Cone18ag0042 Cone-Chr18:261362 Cone5ag0446 Cone-Chr5:1893514 7.58E-223 dispersed
Cone18ag0117 Cone-Chr18:603819 Cone5ag0446 Cone-Chr5:1893514 4.89E-111 dispersed
Cone18ag0594 Cone-Chr18:2981687 Cone5ag0446 Cone-Chr5:1893514 1.95E-196 dispersed
Cone1ag1457 Cone-Chr1:56975016 Cone5ag0446 Cone-Chr5:1893514 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46122 PF00221 Lyase_aromatic 1.10E-153 No_clan Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0446 K14514 - vvi:100250496 796.193