Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0448 ATGGGGTCTCAGGGAGGGGGTGATGGAAACGGCAAGCAATCCCAATACCAGTTATTGGCTCGTCAGAACTCACTGTACAGTCTTACTCTTGACGAGGTCCAAAATCAGCTGGGTGACTTGGGAAAGCCACTGAACAGCATGAACCTTGACGAGCTTCTAAAAAATGTATGGATGGCTGAGCACCAGTCCGTGAGTATGGATATTGAGGGTAGTACTTCGTTGGCCAATCAAACAAGCCTGCAAAGTCAGGCAAGCCTTTCATTAACTAATGCACTGAGCAAGAAGACGGTTGATGAAGTTTGGAGAGATATTGAACAGAGCAAAAATGACGAGGAGAAGGAATACCGGGATAGACAACCTACCTTAGGAGAGATGATTTTGGAGGATTTTTTGGTGAAAGCTGGAGTTGTTGCTGAAGGGTGGGATAAAAAGGGTACGGGTCTTACTGCTGAAGTTGATGCAAGTGTGGAACCGCAGTTTCCCCAACAAAGTCAGTGGATGCAATATCCACAACCGCTACATCAGCATCTGCAGCAAAGTATGATGGGGGTTTATATGCAAGGTCAGCCTATGTCACAGCCATTGCATGTAGTCCCGGGTGCTGTTATGGATGTTTCATATGCTGACAACCAGGTAAGGTTAACATCTCCTCTAATGGGGACGTTATCTGATACACAGGTGCCTGGAAGGAAGAGGAGTGCCCCTGAGGAAATCATTGAGAAGACTGTTGAGCGAAGACATAAGAGGATGATAAAGAACAGGGAATCAGCTGCCCGCTCACGGGCTAGGAAGCAGGCATACACCAATGAATTGGAGAACAAAGTCTCGCGTTTACAAGAGGAAAATGAAAGGCTTAGAGCACGGAAGGAGCTAGAGAATATGCTGCCATCCGCACCTCCCCCTGAGCCGAAGCATCAGCTACGTAGAACATCATCCGCCCCACTCTAA 948 47.57 MGSQGGGDGNGKQSQYQLLARQNSLYSLTLDEVQNQLGDLGKPLNSMNLDELLKNVWMAEHQSVSMDIEGSTSLANQTSLQSQASLSLTNALSKKTVDEVWRDIEQSKNDEEKEYRDRQPTLGEMILEDFLVKAGVVAEGWDKKGTGLTAEVDASVEPQFPQQSQWMQYPQPLHQHLQQSMMGVYMQGQPMSQPLHVVPGAVMDVSYADNQVRLTSPLMGTLSDTQVPGRKRSAPEEIIEKTVERRHKRMIKNRESAARSRARKQAYTNELENKVSRLQEENERLRARKELENMLPSAPPPEPKHQLRRTSSAPL 315
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1901147 1902331 - Conep05aG0046600.1 Cone5ag0448 437466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0448 315 SUPERFAMILY Leucine zipper domain 245 290 IPR046347 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone5ag0448 315 CDD bZIP_plant_BZIP46 245 299 - -
Cone5ag0448 315 Coils Coil 261 295 - -
Cone5ag0448 315 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 248 263 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone5ag0448 315 MobiDBLite consensus disorder prediction 253 291 - -
Cone5ag0448 315 Pfam bZIP transcription factor 245 288 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone5ag0448 315 Gene3D - 243 296 - -
Cone5ag0448 315 FunFam ABSCISIC ACID-INSENSITIVE 5-like protein 2 243 295 - -
Cone5ag0448 315 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 243 288 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone5ag0448 315 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 21 313 IPR043452 GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0045893(InterPro)
Cone5ag0448 315 SMART brlzneu 241 313 IPR004827 GO:0003700(InterPro)|GO:0006355(InterPro)
Cone5ag0448 315 MobiDBLite consensus disorder prediction 253 315 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone17ag1421 Cone-Chr17:9738454 Cone5ag0448 Cone-Chr5:1901147 1.91E-11 dispersed
Cone20ag0061 Cone-Chr20:293587 Cone5ag0448 Cone-Chr5:1901147 1.78E-11 dispersed
Cone20ag0192 Cone-Chr20:827743 Cone5ag0448 Cone-Chr5:1901147 7.66E-36 dispersed
Cone4ag1580 Cone-Chr4:12088474 Cone5ag0448 Cone-Chr5:1901147 1.61E-33 dispersed
Cone5ag0448 Cone-Chr5:1901147 Cone8ag1129 Cone-Chr8:9956494 5.87E-34 dispersed
Cone1ag1459 Cone-Chr1:56983815 Cone5ag0448 Cone-Chr5:1901147 1.24E-181 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46123 PF00583 Acetyltransf_1 2.10E-14 CL0257 Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0448 K14432 - vvi:100266389 433.721