Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0463 ATGGAGAAAAGGAGTGGCATGAGTAACTTCCTAGAAACATCAAAACCCTACTTCGCCATGATCTCCTTACAATTCGGTTACGCCGGCATGAACATCATCACCAAAGTGTCACTCAACAGAGGCATGAGCCACTATGTCCTCGTCGTGTACCGTCACGCCTTTGCGACTTTATCAATCGCCCCGTTTGCGCTCTTCTTCGAGAGGAGAGGCCAACCTAAGATAACGCTCAAGCTTTTCATTCAGATATTCGCCCTTGCTCTTCTCGGGCCGGTGATCGATCAGAACTTCTACTATGCTGGGTTGAAATACACATCGCCAACTTTCTCATGTGCCATGAGCAACATCTTGCCTGCTATGACGTTTGTCATGGCTGTCATCTTCCGGATGGAGAAACTAGACATAAAGAAGGTGAGGTGCCAAGCAAAGGTGGTGGGAACAGCGGTAACGGTGGCGGGAGCGATGCTAATGACGTTGTACAAAGGGCCAATAGTGGAGATGGTGTGGTCGAAGCACGTTCATCCTAGAAAATCTTACGTGACAGACACCAGTGGCGCTACCGACAAAGACTGGCTTAAGGGCTCCATCTTCCTCATCATTGCCACTCTTGCCTGGGCCTCTCTCTTTGTTTTGCAAAACCAAGCGTTGAAGACATACAAGAATCACCAGTTCTCTTTGACGACGCTGGTGTGCTTTGTAGGCACTCTCCAGGCCATTGCTGTCACCTTCGTCACCGAGCACAAAGCCTCTGTTTGGAGAATAGGGTGGGACATGAATCTTCTAGCTGCTGCATATGCTGGAATAGTGACATCAAGTCTGTCATACTACGTGCAAGGGCTGGTGATGAGGAAAAAGGGTCCAGTGTTTGCAACTGCTTTCAGCCCTCTGATGATGATCGTTGTAGCCATCATGGGCTCTTTCATTCTCGCCGAAAAGATCTATCTTGGAGGTATACTTGGAGGAGTGCTGATAGTGATAGGGCTATACTCAGTGCTATGGGGAAAACACAAAGAAAGCTCCGACAACAATATTGGCAGCAGCGATGAGATTCCGGAGGCGATTAAGGGCCCTTTAACTACTACGCCTCAAGATATTGAAGCTAATCATAACACTACTAATTATAACAACAAGCTGATCTCTTCACTTGCTACAATGCCCAAACCCTAG 1164 47.85 MEKRSGMSNFLETSKPYFAMISLQFGYAGMNIITKVSLNRGMSHYVLVVYRHAFATLSIAPFALFFERRGQPKITLKLFIQIFALALLGPVIDQNFYYAGLKYTSPTFSCAMSNILPAMTFVMAVIFRMEKLDIKKVRCQAKVVGTAVTVAGAMLMTLYKGPIVEMVWSKHVHPRKSYVTDTSGATDKDWLKGSIFLIIATLAWASLFVLQNQALKTYKNHQFSLTTLVCFVGTLQAIAVTFVTEHKASVWRIGWDMNLLAAAYAGIVTSSLSYYVQGLVMRKKGPVFATAFSPLMMIVVAIMGSFILAEKIYLGGILGGVLIVIGLYSVLWGKHKESSDNNIGSSDEIPEAIKGPLTTTPQDIEANHNTTNYNNKLISSLATMPKP 387
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1957745 1959434 - Conep05aG0048100.1 Cone5ag0463 437481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0463 387 Pfam EamA-like transporter family 17 157 IPR000620 GO:0016020(InterPro)
Cone5ag0463 387 Pfam EamA-like transporter family 192 331 IPR000620 GO:0016020(InterPro)
Cone5ag0463 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 160 - -
Cone5ag0463 387 PANTHER WAT1-RELATED PROTEIN 18 343 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
Cone5ag0463 387 SUPERFAMILY Multidrug resistance efflux transporter EmrE 251 336 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0503 Cone-Chr3:2497111 Cone5ag0463 Cone-Chr5:1957745 3.17E-175 dispersed
Cone4ag1395 Cone-Chr4:11243721 Cone5ag0463 Cone-Chr5:1957745 2.44E-117 dispersed
Cone5ag0463 Cone-Chr5:1957745 Cone7ag1542 Cone-Chr7:10639328 1.03E-121 dispersed
Cone5ag0463 Cone-Chr5:1957745 Cone1ag1474 Cone-Chr1:57038676 8.30E-250 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0463 - - - 0.0