Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0514 ATGTCAAATTCGGAAGGAGGTAACAACAACGGTGCCATAATCGACCCCCAGCGGCAGCCCCCGGGAAACGGTACCCTCACCGTGAAGAAGCCTCCCTCTAAGGACCGTCACAGCAAGGTCGACGGCCGTGGACGCCGTATCCGCATGCCCATCATATGCGCCGCACGTGTCTTCCAGCTCACTCGCGAACTTGGCCACAAGTCTGATGGCCAGACTATCGAGTGGCTCCTCCGCCAAGCCGAGCCTTCCATCATAGCTGCCACCGGTACTGGTACCACTCCTGCCAGCTTCTCCTCTGTCTCTGCCTCCATTCGCGGGGCCGGCGTATCCACCTCTCTCTCCCCCTCCTCCACTACATCTTCTCTATCCCTCTCTCGACCACAAGCTTTTCTCGGCCCCACGCCCTTCATCCTCGGTAAGCGTGTGCGATCTGACGACGATGGAGGCAGTGGAGCCAAGGACGAAACGGTCTCCGTTGCTAACGCAGTGGGTTCCATTGTGGGTCCCTCGGCCACTGGCGGTTACTGGGCCATACCCACCAGGCCGGACTTCGGCCAGGTCTGGAGCTTCGCCCCGCCGGAGATGGTGGTTCATCCGGCGACGGTGTCTCAGCAGGCGTCGCTGTTTGTTCAGCAGCAGCAGCAGCAGACAGGGGAGGCCTCAGCGGCGAGGGTGGGGAATTACCTTCCTGGACATCTGAATTTGCTTGCTTCTTTGTCGGGCGGCCCGGGCAGTTCCGGCAGGAGAGAGGATGACACTCGTTGA 765 60.92 MSNSEGGNNNGAIIDPQRQPPGNGTLTVKKPPSKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGTGTTPASFSSVSASIRGAGVSTSLSPSSTTSSLSLSRPQAFLGPTPFILGKRVRSDDDGGSGAKDETVSVANAVGSIVGPSATGGYWAIPTRPDFGQVWSFAPPEMVVHPATVSQQASLFVQQQQQQTGEASAARVGNYLPGHLNLLASLSGGPGSSGRREDDTR 254
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2163684 2164781 + Conep05aG0053200.1 Cone5ag0514 437532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0514 254 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 23 187 IPR005333 GO:0003700(InterPro)|GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cone5ag0514 254 MobiDBLite consensus disorder prediction 1 26 - -
Cone5ag0514 254 Pfam TCP family transcription factor 33 120 IPR017887 -
Cone5ag0514 254 MobiDBLite consensus disorder prediction 30 46 - -
Cone5ag0514 254 ProSiteProfiles TCP domain profile. 33 87 IPR017887 -
Cone5ag0514 254 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone3ag0268 Cone-Chr3:1397966 Cone5ag0514 Cone-Chr5:2163684 6.00E-30 dispersed
Cone5ag0514 Cone-Chr5:2163684 Cone6ag0740 Cone-Chr6:3733009 5.26E-26 dispersed
Cone1ag1521 Cone-Chr1:57261889 Cone5ag0514 Cone-Chr5:2163684 4.33E-147 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
46130 None None None None Cone TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0514 K16221 - cit:102623358 320.472