Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0529 | ATGAAGCACATTTTCAAGAAGCTTCATATAGGAAGCAACCACGAGCCAAATCGATCAAATGAATCTCCAGCTGCTTCTGTGATATCTCCGTCGTGTGCGCCCGATCAGCGTACATCGTCTGGTCAGACCTCCGGCAACTCTCAGGCCAGTCCTGCGTCATCGTCTCCATCTGTGGTAACCGTTCCTGCAGGTGGCAACACTGCTACGCCGGCTTCTCCGGCTTCCAATCGACCCGATTATATTTCCTCAGAGGAGGAGTTTCAGGTTCAGCTTGCCCTAGCGATCAGTGCCTCGAATTCAGACTTTCGGGATGATCCGGAGAAAGATCAGATTCGAGCTGCGACGCTGCTTAGCTTGGGGAGCAATCGGATCGATACGGTGGTCAGAGATAGAGATGAGGCTGCGGAAGCCTTGTCGAGGCAATATTGGGAATATAATCTGATAGACTACGAAGAGAAAGTGGTTGATGGATTCTATGATGTCTACGGGATATCCGCAACAACCCAAGGAAAAATGCCAAGTCTGACTGATCTTGAATCAAGCCTTGGTAGTTCTGGGTATGAAGCTGTAGTTGTTAATATAGCAATTGATCATGCTCTTGGAGAGCTTGTGCAAATTGCTCAGTGCATTGCTGATTGCCCAGGCACTGAGATTGGTGTTTTAGTACAGAGGCTTGCCGAACTTGTTACAGGAAATATGGGTGGACCTGTGAAGGATCCTAATATTATGTTAGCAAGGTGGATGGAAAGAAACACCGAGTTGAGGATGTCACTTCACACCAGCATCTTGCCTATTGGGTCTATTAATATTGGCCTCTTACGCCACCGTGCTTTGCTTTTCAAGGTGTTAGCTGACAAAATCAGGATGCCTTGTAGACTGGTAAAAGGTAGTCATTACACTGGCATTGAGGAGGATGCTGTCAACCTTATAAAACTGGAGGATGAAAGGGAATATTTGATTGATCTAATGGCAGCCCCAGGAGCTCTTATACCAACTGATATATTAACTGCAAAGGACAGCAGCTCTAAGCCATACAACCCTAAAATAAGTAAACTCCCCCCTCTCCATACCTTAAACAGCAGAATTTCTTTCTCAAAACCAACATCATCACCTGATGAAGGTAGCAGTCAAAGCTCTGTAGTGGAAAGTAGTTTTCTGCTGGATGGAAAACGAAGGTTTGGAAATACAGAACTTGTTTCATCATTCTTTAGTGAAAATGGTGATATTGGTGTTCCTCTTGGAGCACCAAATAGAGGAACTTCGGGTCACATGGATAATATTTCCTCGTCAGGCATTGGAACTTCTTGGTACAAAGGGGGCCGTGCAGTCAATGGTGGTGTTAGGATGAATGTCAATGTAGTGCCATATGGCCAAAACACCCCCGAGGATTCTAAAAACCTTTTCGCAGATCTTAATCCCTTCCAGATTAAAGGAACTGGAAAGTCTGTTGTACACAATAAGCCCACGGATAATAAAGTTGATGAGCTTCAGGGACTGAGAAACAACCCTGTCCCTGGTCGACCACCTGTACCACAAATGTGGAAGAATCGACATGCTTACAATGAAGTTCCCGGGAAAAAAGGGTATGATTATGTAGGGGGCCTTGTTCCAAGAATTAAGAATGAACCTACAGATTATAATACATTGATGTCATCATCTTCCAGCTCCACCACGTCTGAGAAGATCAATTCGGCTGGTTTAAAATCAGCTAATACAAATATCCCAGGCAGAAATATTGATTCTAGAAACTCAATATCTGCTACCAGTTCAGAATTGGCACCTAGTACAAGTCAGCTCAGTAAACTACCTTTTGTTGAGGAACAGAACAGTAAATCAAGTGGAGAACATCCTGAAAATGGGGAGAACATGCGGAATGAAATCAGTGTGGACAGAGAGAATGAAAATATAATTGGATTCCAAGATCGAAGAAAAAACATATTTATGGGTACCAATTTAAAATTAATGGATTTGGAAAGTCCCAGCTCATCTGTTGATTCAAATAAGAGTAGGGCTGAGCAAGTATTTGATGACGTAGATGTGAGTGAATGTGAAATCCGTTGGGAAGATCTGGTTATTGGTGAAAGAATCGGGCTAGGTTCCTATGGTGAGGTCTACCATGCTGATTGGAATGACACGGAGGTTGCTGTGAAAAAGTTCTTGGACCAGGACTTTTCAGGTGCTGCTTTAGCCGAGTTCAGAAGAGAAGTAAAAATAATGAGACGGTTGCGTCATCCAAATGTCGTTCTTTTCATGGGTGCCGTCACTCGTCCTCCTAACCTCTCTATCATCACTGAGTTTCTTCCAAGAGGAAGCTTGTATCGGATAATACACCGCCCTCATTGTCAAGTTGATGAGAAGCGGAGAATAAAAATGGGTCTTGATGTGGCAAGGGGCATGAATTGCTTGCATACAAGCACACCAACTATTGTCCACCGGGATCTGAAGTCACCAAATCTCTTGGTTGATAAGAACTGGAATGTGAAGGTATGTGATTTTGGGTTGTCACGCTTGAAGCACAATACCTTCTTGTCATCAAAATCCACTGGAGGAACGCCTGAGTGGATGGCACCCGAAGTTCTTCGTAATGAACCCTCAAATGAGAAATGTGATGTATATAGCTTTGGAGTAATTCTATGGGAGCTTGCTACTTTGAGACTACCTTGGAGTGGGATGAACCCGATGCAAGTTGTTGGTGCAGTAGGGTTCCAAAACCGCCGCCTTGAAATCCCGAAAGAAGTTGACCCCTTGGTAGCGAGGATAATTTTTGAATGTTGGCAAACGGAGCCGAATTTGCGCCCCTCGTTTGCTCAGATCACTGTAGCTCTCAAGCCCTTGCAGCGACTCGTCATTTCTTCAAATCTGGACCAGCCAAGCTCGCCCCTGGCTCAAGAGATTTCAGTAAATTCTACTCCTTGA | 2916 | 44.41 | MKHIFKKLHIGSNHEPNRSNESPAASVISPSCAPDQRTSSGQTSGNSQASPASSSPSVVTVPAGGNTATPASPASNRPDYISSEEEFQVQLALAISASNSDFRDDPEKDQIRAATLLSLGSNRIDTVVRDRDEAAEALSRQYWEYNLIDYEEKVVDGFYDVYGISATTQGKMPSLTDLESSLGSSGYEAVVVNIAIDHALGELVQIAQCIADCPGTEIGVLVQRLAELVTGNMGGPVKDPNIMLARWMERNTELRMSLHTSILPIGSINIGLLRHRALLFKVLADKIRMPCRLVKGSHYTGIEEDAVNLIKLEDEREYLIDLMAAPGALIPTDILTAKDSSSKPYNPKISKLPPLHTLNSRISFSKPTSSPDEGSSQSSVVESSFLLDGKRRFGNTELVSSFFSENGDIGVPLGAPNRGTSGHMDNISSSGIGTSWYKGGRAVNGGVRMNVNVVPYGQNTPEDSKNLFADLNPFQIKGTGKSVVHNKPTDNKVDELQGLRNNPVPGRPPVPQMWKNRHAYNEVPGKKGYDYVGGLVPRIKNEPTDYNTLMSSSSSSTTSEKINSAGLKSANTNIPGRNIDSRNSISATSSELAPSTSQLSKLPFVEEQNSKSSGEHPENGENMRNEISVDRENENIIGFQDRRKNIFMGTNLKLMDLESPSSSVDSNKSRAEQVFDDVDVSECEIRWEDLVIGERIGLGSYGEVYHADWNDTEVAVKKFLDQDFSGAALAEFRREVKIMRRLRHPNVVLFMGAVTRPPNLSIITEFLPRGSLYRIIHRPHCQVDEKRRIKMGLDVARGMNCLHTSTPTIVHRDLKSPNLLVDKNWNVKVCDFGLSRLKHNTFLSSKSTGGTPEWMAPEVLRNEPSNEKCDVYSFGVILWELATLRLPWSGMNPMQVVGAVGFQNRRLEIPKEVDPLVARIIFECWQTEPNLRPSFAQITVALKPLQRLVISSNLDQPSSPLAQEISVNSTP | 971 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 2234623 | 2241264 | - | Conep05aG0054800.1 | Cone5ag0529 | 437547 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0529 | 971 | FunFam | Serine/threonine-protein kinase isoform 1 | 681 | 768 | - | - | |
Cone5ag0529 | 971 | Pfam | Protein tyrosine and serine/threonine kinase | 691 | 940 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone5ag0529 | 971 | CDD | STKc_MAP3K-like | 696 | 939 | - | - | |
Cone5ag0529 | 971 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 38 | 943 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cone5ag0529 | 971 | Gene3D | Transferase(Phosphotransferase) domain 1 | 769 | 952 | - | - | |
Cone5ag0529 | 971 | MobiDBLite | consensus disorder prediction | 538 | 627 | - | - | |
Cone5ag0529 | 971 | MobiDBLite | consensus disorder prediction | 1 | 79 | - | - | |
Cone5ag0529 | 971 | MobiDBLite | consensus disorder prediction | 479 | 514 | - | - | |
Cone5ag0529 | 971 | Gene3D | Phosphorylase Kinase; domain 1 | 683 | 767 | - | - | |
Cone5ag0529 | 971 | ProSitePatterns | Protein kinases ATP-binding region signature. | 696 | 718 | IPR017441 | GO:0005524(InterPro) | |
Cone5ag0529 | 971 | SMART | serkin_6 | 690 | 945 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone5ag0529 | 971 | Pfam | Ethylene-responsive protein kinase Le-CTR1 | 135 | 330 | - | - | |
Cone5ag0529 | 971 | PRINTS | Tyrosine kinase catalytic domain signature | 913 | 935 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone5ag0529 | 971 | PRINTS | Tyrosine kinase catalytic domain signature | 850 | 860 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone5ag0529 | 971 | PRINTS | Tyrosine kinase catalytic domain signature | 764 | 777 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone5ag0529 | 971 | PRINTS | Tyrosine kinase catalytic domain signature | 803 | 821 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone5ag0529 | 971 | PRINTS | Tyrosine kinase catalytic domain signature | 869 | 891 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cone5ag0529 | 971 | SUPERFAMILY | Protein kinase-like (PK-like) | 679 | 958 | IPR011009 | - | |
Cone5ag0529 | 971 | MobiDBLite | consensus disorder prediction | 15 | 79 | - | - | |
Cone5ag0529 | 971 | ProSiteProfiles | Protein kinase domain profile. | 690 | 949 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cone5ag0529 | 971 | MobiDBLite | consensus disorder prediction | 611 | 627 | - | - | |
Cone5ag0529 | 971 | MobiDBLite | consensus disorder prediction | 544 | 610 | - | - | |
Cone5ag0529 | 971 | FunFam | PAS domain-containing protein tyrosine kinase family protein | 768 | 957 | - | - | |
Cone5ag0529 | 971 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 809 | 821 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone20ag0268 | Cone-Chr20:1190376 | Cone5ag0529 | Cone-Chr5:2234623 | 2.83E-201 | dispersed | |
Cone4ag1661 | Cone-Chr4:12479695 | Cone5ag0529 | Cone-Chr5:2234623 | 1.66E-222 | dispersed | |
Cone5ag0529 | Cone-Chr5:2234623 | Cone7ag1292 | Cone-Chr7:9521345 | 1.56E-221 | dispersed | |
Cone1ag1732 | Cone-Chr1:58090753 | Cone5ag0529 | Cone-Chr5:2234623 | 0 | wgd | |
Cone4ag1290 | Cone-Chr4:10664639 | Cone5ag0529 | Cone-Chr5:2234623 | 2.18E-104 | wgd | |
Cone5ag0529 | Cone-Chr5:2234623 | Cone7ag0269 | Cone-Chr7:1118657 | 1.19E-38 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
82831 | PF00403 | HMA | 4.70E-18 | No_clan | Cone | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0529 | - | - | - | 0.0 |