Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0595 ATGATATCCATTGCTGCTTCTAATCCCCTCGAGACGACGACCCAGAACAAGCTGGATCAACAAGCAACGTCAAATAACATCAACTCCCAAACTACTCATGTTTTCCGATCGAAATTACCAGACATACCCATCCCCAACCACCTCCCTTTACACACATACTGTTTCGAAAACCTCTCTCAATTCTCTGACAAGCCATGTTTAATCGTCGGTTCGACTGGAAAATCCTACACTTTCTCAGAGACTCATCTCATCTGTCGAAAAACCGCCGCTGGATTGTCCTGCCACGGAATTAAGAAGAACGATGTCATCATGGTCCTCCTCCAGAACTGCGCCGAGTTCGTCTTCACCTTCATGGCTGCCTCCATGATAGGCGCTGTCGTCACCACCGCCAACCCGTTCTACGCTTCCGCTGAGCTTTTCAAACAGCTCAAAACCTCCGGGGCGAAACTCATCATAACACAATCTCAATACGTCGATAAGCTCAGATCAGATGACCTCGTAAACGATCTAAAACTCGGCAAGGATTTCGCTGTAATCACAATCGACGATCCGCCAGAGAATTGTCTTCATTTCTCAGTAATTTCAGAGGCGGATGAAAACAGCGTCGTTATAGACTTAGAAAATATAACGAATAAAAACTTCGACCCAAACGACGCCATTGCACTACCGTTTTCCTCGGGCACAACGGGGTTACCAAAGGGTGTTATTTTAACCCACAAGAGTTTGATTACGAGTTTGGCCCAGCAAGTTGACGGCGAAAATCCCAACTTGTATTTGAAACAAAACGACGTCGTTCTATGCGTGCTTCCTATGTTTCACATATACGCTCTGAACAGTGTGCTTCTATGTTCGCTCAGAGCGGGAGCGGCGGTTTTGTTGATGCAGAAGTTTGAGATTGGGTCGCTGCTGGAGCTGATTCAACGTCATCGTGTGTCTGTGGCGGCGGTGGTTCCGCCACTTGTACTGGCTCTGGCGAAGAATCCTATGGTGGAGGATTATGACTTGAGCTCGATCCGAGTGGTGCTCTCCGGGGCGGCGCCGCTCGGAAAGCCGCTGGTGGAGGCGTTTAGGAGCCGTGTGCCTCAGGCTATTCTTGGACAGGGTTACGGGATGACTGAGGCGGGGCCGGTGTTATCAATGTGCTTAGCATTTGCTAAGCAGCCATTCCCAACAAAGGCAGGTTCATGTGGGACTGTGGTTAGAAATGCCGAGCTTAAAGTTATCGATCCGGAAACCGGATTCTCACTCGACTACAATCAACCCGGAGAGATTTGTATTCGCGGGTCCCAAATTATGAAAGGATACTTGAACGATAAAGAGGCCACAGCAAACACGATTGATGTAGAGGGATGGCTTCATACTGGCGACATTGGTTATGTGGATGACAATGAGGAGGTTTTCATAGTTGATCGAGTCAAGGAACTTATCAAATTCAAAGGCTTTCAGGTCCCACCAGCAGAGCTTGAGGCCCTTCTTGTAAGCCATCCATCAATTGCAGATGCAGCTGTTGTCTCCCAAAAAGATGAAGTAGCTGGTGAAGTTCCTGTTGCATTTGTGGTCAGATCAAATGGTTTTGAACTCACTGAGGATGCAGTCAAAGAGTTCATAGCCAAGCAGGTGGTGTTCTACAAGAAATTGCACAAGGTCTACTTTGTTCATGTGCTTCCCCGGTCTCCTGCCGGAAAAATTCTGAGGAAAGATCTGAGGGCGAAGCTAGAAACAGCTTCCTCCTCCTCCTCTTAA 1743 47.96 MISIAASNPLETTTQNKLDQQATSNNINSQTTHVFRSKLPDIPIPNHLPLHTYCFENLSQFSDKPCLIVGSTGKSYTFSETHLICRKTAAGLSCHGIKKNDVIMVLLQNCAEFVFTFMAASMIGAVVTTANPFYASAELFKQLKTSGAKLIITQSQYVDKLRSDDLVNDLKLGKDFAVITIDDPPENCLHFSVISEADENSVVIDLENITNKNFDPNDAIALPFSSGTTGLPKGVILTHKSLITSLAQQVDGENPNLYLKQNDVVLCVLPMFHIYALNSVLLCSLRAGAAVLLMQKFEIGSLLELIQRHRVSVAAVVPPLVLALAKNPMVEDYDLSSIRVVLSGAAPLGKPLVEAFRSRVPQAILGQGYGMTEAGPVLSMCLAFAKQPFPTKAGSCGTVVRNAELKVIDPETGFSLDYNQPGEICIRGSQIMKGYLNDKEATANTIDVEGWLHTGDIGYVDDNEEVFIVDRVKELIKFKGFQVPPAELEALLVSHPSIADAAVVSQKDEVAGEVPVAFVVRSNGFELTEDAVKEFIAKQVVFYKKLHKVYFVHVLPRSPAGKILRKDLRAKLETASSSSS 580
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2547552 2550808 - Conep05aG0061600.1 Cone5ag0595 437613
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0595 580 SUPERFAMILY Acetyl-CoA synthetase-like 37 574 - -
Cone5ag0595 580 ProSitePatterns Putative AMP-binding domain signature. 222 233 IPR020845 -
Cone5ag0595 580 Gene3D - 25 472 IPR042099 -
Cone5ag0595 580 Pfam AMP-binding enzyme C-terminal domain 487 562 IPR025110 -
Cone5ag0595 580 FunFam Long-chain-fatty-acid--CoA ligase FadD 36 473 - -
Cone5ag0595 580 Gene3D - 473 577 IPR045851 -
Cone5ag0595 580 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 29 569 - GO:0016207(PANTHER)|GO:0016405(PANTHER)
Cone5ag0595 580 FunFam 4-coumarate--CoA ligase 2 474 575 - -
Cone5ag0595 580 CDD 4CL 44 568 - -
Cone5ag0595 580 Pfam AMP-binding enzyme 56 436 IPR000873 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag1085 Cone-Chr4:9393443 Cone5ag0595 Cone-Chr5:2547552 2.90E-243 dispersed
Cone5ag0595 Cone-Chr5:2547552 Cone7ag1043 Cone-Chr7:8019733 1.95E-240 dispersed
Cone1ag0891 Cone-Chr1:54515305 Cone5ag0595 Cone-Chr5:2547552 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0595 K01904 - rcu:8280463 889.797