Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0675 ATGTATAACAACATTGATTATCTACAGAGTCAAAATAATCTCAACCCAATTAGTTTCGTAGCAGTCAAGATATTATCGAGTAAATCAAAAGTCAACGGCCAAGACTTTATCAATGAAGTTGCAACCATTGGCAGGATCCACCATGTTAATTTGGTCCAACTTATCGGCTTCTGTGTAGAAGGATCAAAACGTGCTCTTGTTTACGACTTCATGCCAAATGGATCTCTTGGTAAATTCATATTCTCCCCAGAAGGAAGAGTTGCTATAAGTTATGAGAAGATGTTTGAAATCTCTCTTGGAATTGCCCGTGGGATTGAGTATCTCCATCAAGGGTGTGAGAAGAAAATTCTGCATTTTGATATCAAGCCTCATAACATTCTTTTAGATGAGAATTTTACACCCAAAATTTCTGATTTCAGGTTGGCTAGATTGTTTCCAGCAGATGAAAGCATTGTGAATTTAACTGCCGTGAGAGGAACACTAGGTTACATGACTCCAGAGCTATGCTACAAAAACCTTGGAGGGGTTTCCCATAAAGCTGATGTCTATAGCTTTGGGATGTTATTGATGGAAATGGAAGGAAAAAGGAAGAATGTTAATAAACTTTGCAGAGCACTCGAGTCAAGTGTTCTTTCCTTTATGGGCTTATGA 651 38.1 MYNNIDYLQSQNNLNPISFVAVKILSSKSKVNGQDFINEVATIGRIHHVNLVQLIGFCVEGSKRALVYDFMPNGSLGKFIFSPEGRVAISYEKMFEISLGIARGIEYLHQGCEKKILHFDIKPHNILLDENFTPKISDFRLARLFPADESIVNLTAVRGTLGYMTPELCYKNLGGVSHKADVYSFGMLLMEMEGKRKNVNKLCRALESSVLSFMGL 216
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2883943 2884693 - Conep05aG0069900.1 Cone5ag0675 437693
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0675 216 SMART serkin_6 2 214 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0675 216 FunFam Os07g0541700 protein 71 160 - -
Cone5ag0675 216 ProSitePatterns Serine/Threonine protein kinases active-site signature. 116 128 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag0675 216 ProSiteProfiles Protein kinase domain profile. 1 216 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0675 216 Pfam Protein kinase domain 19 192 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0675 216 SUPERFAMILY Protein kinase-like (PK-like) 19 194 IPR011009 -
Cone5ag0675 216 Gene3D Phosphorylase Kinase; domain 1 8 71 - -
Cone5ag0675 216 PANTHER RUST RESISTANCE KINASE LR10-RELATED 14 208 IPR045874 GO:0004672(InterPro)
Cone5ag0675 216 Gene3D Transferase(Phosphotransferase) domain 1 72 211 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0675 Cone-Chr5:2883943 Cone5ag0678 Cone-Chr5:2889866 4.50E-91 dispersed
Cone5ag0675 Cone-Chr5:2883943 Cone5ag0676 Cone-Chr5:2885462 1.87E-48 tandem
Cone1ag0972 Cone-Chr1:54878381 Cone5ag0675 Cone-Chr5:2883943 8.66E-76 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82841 PF11957 efThoc1 2.00E-97 No_clan Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0675 - - - 0.0