Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0747 ATGGGATTGGAAGGAGACGAAGAATCAGCCATGCAAGTCCCAAGAAAATCCTTATTCCGCTTCAACTCTCCTCTCATCCAAGTTTGCTTGATTGGGTTCGTCTGCTTTTGCTGCCCCGGCATGTTCAACGCACTTAGTGGCATGGGCGGAGGTGGTCAGGTGGACCACACTGCGGCCGACAACGCCTCAACCGCCCTTTACACCACCTTTGCCATTTTCGGAATCCTAGGAGGTGGAATCTACAACATCCTTGGGCCCCACCTCACCCTCTTCGCCGGTTGTACCACTTACGTCCTCTACACCGGCTCTTTCCTCTACTACAACCACCACCAAAACCAGACATTCGCCATCATTGCCGGAGCAATTCTCGGGATTGGAGCCGGACTTCTCTGGGCCGGAGAAGGCGCCATTATGACATCGTACCCTCCACCTGACCGGAAAGGAACTTACATCTCAATTTTCTGGAGTATCTTCAACATGGGTGGTGTAATTGGTGGTTTAATCCCTTTTGTTCTTAACTACCATAGAACTGATGCAATTTCAGTTAATGATGCGACATACATCGCTTTCATGTGCTTTATGTCGGCTGGGGCTCTCCTGTCCTTGGCCGTTTTGCCGCCAAGTAAGGTGGTTAGAGATGATGGGACACGTTGTACCAACATCAAGTACTCAAACGTCACAACTGAAGCGGTCGAGATTTATAAATTGTTTTTGAATTGGAAAATGTTGTTAATAGTCCCAGCTGCTTGGGCAAGCAACTACTTCTACACTTACCAGTTCAATAATGTTAATGGGACATTGTTCAATGTAAGGACTAGAGGGTTTAACAATGTTTTTTACTGGGGAGCACAGATGTTCGGGTCATTGGGGATAGGATATGTGTTGGATTTTGGCTTTAAGAGTAGGAAGATGAGAGGTTATGTTGGGATCGGATTTGTTGCTATACTTGGGACTGCAATATGGGGTGGTGGTTTAGCTAAGCAGCTCGGATATTCCCGGAATAATGTTCCGCTCAAGTTGGATTTTAAGAATTCAGGTTCGGATTTTGCAGGGCCGTTTCTGCTGTACTTTAGTTACGGGTTGCTTGATGCTATGTTTCAGACTCTGGTTTATTGGGTTATTGGTGCATTGGCAGATGATTCTGAAACTCTTAGCAGGTATAGTGGATTCTATAAAGGAGTTCAGAGTGCAGGCGCAGCAGTTGCTTGGCAAGTAGATACACATAATGTATCCTTCATTTCTCAGGTGATTGTGAATTGGGTACTCACTACTGTTAGCTATCCCCTGCTCGCTCTTCTCGTCTATTTGGCCGTGAAGGATGATATCAACACCGAACAGGAAAACGGAAAGGCGGTTGCTCCCGCTTCAAACAAGGAGCTTCCTTCTTCACTGTGA 1395 46.52 MGLEGDEESAMQVPRKSLFRFNSPLIQVCLIGFVCFCCPGMFNALSGMGGGGQVDHTAADNASTALYTTFAIFGILGGGIYNILGPHLTLFAGCTTYVLYTGSFLYYNHHQNQTFAIIAGAILGIGAGLLWAGEGAIMTSYPPPDRKGTYISIFWSIFNMGGVIGGLIPFVLNYHRTDAISVNDATYIAFMCFMSAGALLSLAVLPPSKVVRDDGTRCTNIKYSNVTTEAVEIYKLFLNWKMLLIVPAAWASNYFYTYQFNNVNGTLFNVRTRGFNNVFYWGAQMFGSLGIGYVLDFGFKSRKMRGYVGIGFVAILGTAIWGGGLAKQLGYSRNNVPLKLDFKNSGSDFAGPFLLYFSYGLLDAMFQTLVYWVIGALADDSETLSRYSGFYKGVQSAGAAVAWQVDTHNVSFISQVIVNWVLTTVSYPLLALLVYLAVKDDINTEQENGKAVAPASNKELPSSL 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3217760 3219247 - Conep05aG0077200.1 Cone5ag0747 437765

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0747 464 Pfam Ion channel regulatory protein UNC-93 53 247 IPR010291 -
Cone5ag0747 464 SUPERFAMILY MFS general substrate transporter 19 437 IPR036259 -
Cone5ag0747 464 CDD MFS_unc93-like 27 426 - -
Cone5ag0747 464 PANTHER ET TRANSLATION PRODUCT-RELATED 22 446 IPR051617 -
Cone5ag0747 464 Gene3D MFS general substrate transporter like domains 20 439 IPR036259 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0747 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone1ag1036 Cone-Chr1:55186083 Cone5ag0747 Cone-Chr5:3217760 1.19e-311 dispersed
Cone1ag1037 Cone-Chr1:55190287 Cone5ag0747 Cone-Chr5:3217760 6.71E-271 dispersed
Cone1ag1038 Cone-Chr1:55193486 Cone5ag0747 Cone-Chr5:3217760 9.17E-93 dispersed
Cone1ag1039 Cone-Chr1:55194258 Cone5ag0747 Cone-Chr5:3217760 6.20E-69 dispersed
Cone5ag0747 Cone-Chr5:3217760 Cone8ag0906 Cone-Chr8:8795432 4.43E-88 dispersed
Cone5ag0746 Cone-Chr5:3210606 Cone5ag0747 Cone-Chr5:3217760 0 tandem
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g939 . . . . . . . . . . . . . . . . Cpe14g00005 . . . . . . . . . . . . . . Cone1ag1036 Cone5ag0747 . . . . . . . . . . . . . . . . . Cma16g00005 . . . . . . . . . . . . . . . . . . . . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0002967 0 4 1 0 1 2 1 2 2 2 2 2 1 2 2 1 2 5 1 2 2 1 2 2 2 2 2 2 0 1 51