Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0777 ATGAAACAAACCCACATGCTCGAACTCATTCTAATTACATCTTCGGTTTTCATTCTGATATTTCTCTTACTTCTCATCATCTTCTTCTTTTACCGCAAGAAACTTCCTAAAACAGAGCAGGCGGACTTAGAAAAAGCAGAGCAGAAACAGAGAGAAGAAGCAAGAACAGAGGATCTGGTCACTTTTCAAGGCGGTCAAGACTTGACCATTTTTGACATATTGGATGCTCCTGGTGAAGTGATTGGAAAATCAGACTATGGTACTTTGTACAAGGCATTTTTGCAGAGGAATAGTACTTTGAGGCTGCTTAGATTCTTAAGGCCTGTTTGTACTTCAAAAGATAAAGATTTTGAGGATTTGGTTCGTTTGATTGGGTGTGTTAGACATCCTAATTTGGTTCCTTTGTTGGGTTTTTATGCTGGATCAAGAGGTGAGAAGCTCCTTGTTCATCCTTTCTATGGCCGTGGTAATCTGGCTGAATTCATTAGAGATGGAGGCAACGACTCTAAAAGATGGGCCATCATCCTCAAAATCTCAATGGGTATAGCAAAAGGGTTAGACAATCTTCACACAGGCTATAACAAGCCCTTAGTCCACGGAAATCTCAAGTCCAAGAACGTACTTTTGGACCGAAACTACCAACCCTGCGTCTCGGATTTCGGCCTACATCTCCTTCTAAATCCAACAACCGGCCAAGAAATGCTAGAAGCTTCCGCAATGGATGGTTACAAAGCACCCGAGCTTATCAAAATGAGAGATGTAAGTGAAGAGAGTGATGTTTATAGCTACGGAGTGATCTTATTGGAGTTAATTTCTGGGAAAGAGGCGGTTAACGAGAATCCTACCTCCGATGAGGATTTTTGCTTGCCTAACTTTATGAGGAATGCAGTGTTAGGACATAGGATTGGGGACTTGTTTCATCCGGATATACTTCTTATGAGCAATAGAAGAGGTAGTAGTAGTAATAATGAGGGGTTGCTTAGCGAAGAGACGATTCTTAAGTTGTTCCAGCTTGCTATGGCTTCTTGTTCTCCCTCTCCTTCTCTTAGACCCAGTTTTAAGCAAGTAATATCGAAGCTTGAAGAAATTGCAAAATGA 1098 41.26 MKQTHMLELILITSSVFILIFLLLLIIFFFYRKKLPKTEQADLEKAEQKQREEARTEDLVTFQGGQDLTIFDILDAPGEVIGKSDYGTLYKAFLQRNSTLRLLRFLRPVCTSKDKDFEDLVRLIGCVRHPNLVPLLGFYAGSRGEKLLVHPFYGRGNLAEFIRDGGNDSKRWAIILKISMGIAKGLDNLHTGYNKPLVHGNLKSKNVLLDRNYQPCVSDFGLHLLLNPTTGQEMLEASAMDGYKAPELIKMRDVSEESDVYSYGVILLELISGKEAVNENPTSDEDFCLPNFMRNAVLGHRIGDLFHPDILLMSNRRGSSSNNEGLLSEETILKLFQLAMASCSPSPSLRPSFKQVISKLEEIAK 365
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3320127 3322268 - Conep05aG0080200.1 Cone5ag0777 437795
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0777 365 Gene3D Phosphorylase Kinase; domain 1 33 152 - -
Cone5ag0777 365 Pfam Protein tyrosine and serine/threonine kinase 79 279 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag0777 365 ProSiteProfiles Protein kinase domain profile. 75 363 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0777 365 Gene3D Transferase(Phosphotransferase) domain 1 154 365 - -
Cone5ag0777 365 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 9 364 IPR052451 -
Cone5ag0777 365 SUPERFAMILY Protein kinase-like (PK-like) 78 361 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0777 Cone-Chr5:3320127 Cone2ag0274 Cone-Chr2:1410258 1.36E-50 dispersed
Cone1ag1064 Cone-Chr1:55285078 Cone5ag0777 Cone-Chr5:3320127 2.54E-230 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82845 PF13844 Glyco_transf_41 1.20E-82 CL0113 Cone PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0777 - - - 0.0