Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0824 ATGACGGAGGCATGCGGAAGAATGCTTAGCGGAGATGACGACGAGACACCTTTCAAATGCAGGGAGCGACGTCGACGGAGAATAGAGATGCGGCGGTTGGCCACAGCATCTGCTGCCGCTGGATCGCCTCCTCCAGCGAGTCAGGGCCGGACAGTGAACCGTACTGATATCTCGGGTTGTGAAGCCAAGCGTATTCGAGCTCGAGCGGAAGAGGCGAGTGCTCCTCAGGCGAATTCTTCTTCCTCGTCGTCGTCTGAAGATGCGGAGGCGATTGCTTCGTCGCCGCTAGTCTCTTTTCCGGGTGAGGGTCATGCTAGGGAGCCGGTGTTTGGAACGATGTCGATTTCAGGAAGGTCACGTGATATGGAGGACGCAATAGCTGTACGGACCGGGCTTTGCCGGCCGAAGATTAGCCGACGGCAACCGGTGCATTTATTTTCTGTGTATGATGGACACGGAGGGTCCCACGTGGCGGCAATGTGTAGGGACAGGCTGCACGTACTAATAGAGGAGGAGTTGATGAGTATGTCGGACACGCGCGAAACGGAGGAGAGTGTGGTTGGGAGCAGGGCTGCGGATGAAGCGGAGGAAGAGGAGGTTGGGTGGAGTAGAGTGATGAAGAATAGCTTCAAGAGAATGGACGAGGTGGCAATGAATACCTGCGCGTGTGGGAGCATTGGAGGGCAGTGTGGCTGCCACCCTATGGAGGTGGCTCTTTGCGGGTCAACCGCCGTGGTCTGTGTGCTCACTCCTGACCATATCGTCGTTGCCAACTGCGGTGATTCACGTGCTGTCCTATGCCGTGGAGGGAGAGCCATTCCTCTATCTAATGACCACAAGCCAGATAGAGCAGATGAACTGGCAAGAATCGAGGTGGCCGGGGGGCGGGTCATCTTTGTTAATGGGGCTCGGGTTGAAGGCATTCTTGCAATGTCCCGAGCAATAGGCTTATGA 954 56.29 MTEACGRMLSGDDDETPFKCRERRRRRIEMRRLATASAAAGSPPPASQGRTVNRTDISGCEAKRIRARAEEASAPQANSSSSSSSEDAEAIASSPLVSFPGEGHAREPVFGTMSISGRSRDMEDAIAVRTGLCRPKISRRQPVHLFSVYDGHGGSHVAAMCRDRLHVLIEEELMSMSDTRETEESVVGSRAADEAEEEEVGWSRVMKNSFKRMDEVAMNTCACGSIGGQCGCHPMEVALCGSTAVVCVLTPDHIVVANCGDSRAVLCRGGRAIPLSNDHKPDRADELARIEVAGGRVIFVNGARVEGILAMSRAIGL 317
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3528752 3531605 + Conep05aG0085000.1 Cone5ag0824 437842
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0824 317 SMART PP2C_4 98 317 IPR001932 -
Cone5ag0824 317 CDD PP2Cc 109 316 IPR001932 -
Cone5ag0824 317 MobiDBLite consensus disorder prediction 41 55 - -
Cone5ag0824 317 ProSitePatterns PPM-type phosphatase domain signature. 145 153 IPR000222 GO:0043169(InterPro)
Cone5ag0824 317 MobiDBLite consensus disorder prediction 1 91 - -
Cone5ag0824 317 ProSiteProfiles PPM-type phosphatase domain profile. 109 317 IPR001932 -
Cone5ag0824 317 MobiDBLite consensus disorder prediction 73 91 - -
Cone5ag0824 317 Pfam Protein phosphatase 2C 111 316 IPR001932 -
Cone5ag0824 317 PANTHER PROTEIN PHOSPHATASE 75 316 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone5ag0824 317 SUPERFAMILY PP2C-like 109 316 IPR036457 -
Cone5ag0824 317 Gene3D - 104 317 IPR036457 -
Cone5ag0824 317 MobiDBLite consensus disorder prediction 8 23 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0824 Cone-Chr5:3528752 Cone9ag0849 Cone-Chr9:4151370 2.94E-41 dispersed
Cone5ag0824 Cone-Chr5:3528752 Cone5ag1121 Cone-Chr5:4987859 1.42E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0824 K14497 - csv:101206634 343.584