Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0824 | ATGACGGAGGCATGCGGAAGAATGCTTAGCGGAGATGACGACGAGACACCTTTCAAATGCAGGGAGCGACGTCGACGGAGAATAGAGATGCGGCGGTTGGCCACAGCATCTGCTGCCGCTGGATCGCCTCCTCCAGCGAGTCAGGGCCGGACAGTGAACCGTACTGATATCTCGGGTTGTGAAGCCAAGCGTATTCGAGCTCGAGCGGAAGAGGCGAGTGCTCCTCAGGCGAATTCTTCTTCCTCGTCGTCGTCTGAAGATGCGGAGGCGATTGCTTCGTCGCCGCTAGTCTCTTTTCCGGGTGAGGGTCATGCTAGGGAGCCGGTGTTTGGAACGATGTCGATTTCAGGAAGGTCACGTGATATGGAGGACGCAATAGCTGTACGGACCGGGCTTTGCCGGCCGAAGATTAGCCGACGGCAACCGGTGCATTTATTTTCTGTGTATGATGGACACGGAGGGTCCCACGTGGCGGCAATGTGTAGGGACAGGCTGCACGTACTAATAGAGGAGGAGTTGATGAGTATGTCGGACACGCGCGAAACGGAGGAGAGTGTGGTTGGGAGCAGGGCTGCGGATGAAGCGGAGGAAGAGGAGGTTGGGTGGAGTAGAGTGATGAAGAATAGCTTCAAGAGAATGGACGAGGTGGCAATGAATACCTGCGCGTGTGGGAGCATTGGAGGGCAGTGTGGCTGCCACCCTATGGAGGTGGCTCTTTGCGGGTCAACCGCCGTGGTCTGTGTGCTCACTCCTGACCATATCGTCGTTGCCAACTGCGGTGATTCACGTGCTGTCCTATGCCGTGGAGGGAGAGCCATTCCTCTATCTAATGACCACAAGCCAGATAGAGCAGATGAACTGGCAAGAATCGAGGTGGCCGGGGGGCGGGTCATCTTTGTTAATGGGGCTCGGGTTGAAGGCATTCTTGCAATGTCCCGAGCAATAGGCTTATGA | 954 | 56.29 | MTEACGRMLSGDDDETPFKCRERRRRRIEMRRLATASAAAGSPPPASQGRTVNRTDISGCEAKRIRARAEEASAPQANSSSSSSSEDAEAIASSPLVSFPGEGHAREPVFGTMSISGRSRDMEDAIAVRTGLCRPKISRRQPVHLFSVYDGHGGSHVAAMCRDRLHVLIEEELMSMSDTRETEESVVGSRAADEAEEEEVGWSRVMKNSFKRMDEVAMNTCACGSIGGQCGCHPMEVALCGSTAVVCVLTPDHIVVANCGDSRAVLCRGGRAIPLSNDHKPDRADELARIEVAGGRVIFVNGARVEGILAMSRAIGL | 317 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3528752 | 3531605 | + | Conep05aG0085000.1 | Cone5ag0824 | 437842 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0824 | 317 | SMART | PP2C_4 | 98 | 317 | IPR001932 | - | |
Cone5ag0824 | 317 | CDD | PP2Cc | 109 | 316 | IPR001932 | - | |
Cone5ag0824 | 317 | MobiDBLite | consensus disorder prediction | 41 | 55 | - | - | |
Cone5ag0824 | 317 | ProSitePatterns | PPM-type phosphatase domain signature. | 145 | 153 | IPR000222 | GO:0043169(InterPro) | |
Cone5ag0824 | 317 | MobiDBLite | consensus disorder prediction | 1 | 91 | - | - | |
Cone5ag0824 | 317 | ProSiteProfiles | PPM-type phosphatase domain profile. | 109 | 317 | IPR001932 | - | |
Cone5ag0824 | 317 | MobiDBLite | consensus disorder prediction | 73 | 91 | - | - | |
Cone5ag0824 | 317 | Pfam | Protein phosphatase 2C | 111 | 316 | IPR001932 | - | |
Cone5ag0824 | 317 | PANTHER | PROTEIN PHOSPHATASE | 75 | 316 | IPR015655 | GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0005634(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER) | |
Cone5ag0824 | 317 | SUPERFAMILY | PP2C-like | 109 | 316 | IPR036457 | - | |
Cone5ag0824 | 317 | Gene3D | - | 104 | 317 | IPR036457 | - | |
Cone5ag0824 | 317 | MobiDBLite | consensus disorder prediction | 8 | 23 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone5ag0824 | Cone-Chr5:3528752 | Cone9ag0849 | Cone-Chr9:4151370 | 2.94E-41 | dispersed | |
Cone5ag0824 | Cone-Chr5:3528752 | Cone5ag1121 | Cone-Chr5:4987859 | 1.42E-57 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0824 | K14497 | - | csv:101206634 | 343.584 |