Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0838 ATGAAAAAGTTTCCTATAGCCATGGCAAAATTTTCCAAACTTTTTGGTCCACTCATGTCTTTAAAGCTTGGAACTCAGCTCGTAGTTGTTGCTTCCTCTCCGAGAGCTGCCGTTGAAATCCTCAAGACCCACGATCGTCTATTGTCGGGCCGACATGCCCCAAGACTGAGGCCGATCAAAGATGTTGATGATTACACCACATTCTCCCTCATTTGGGCCCATGAATGCCATGACAATTGGAAGCTCTTGCGGTCATTGTGCCGTACCGAGCTGTTTTCGCCCAGAGCAATTGAGCAGCAGGGAAGTACAAGGCAAAGAAAGATGGATGAGATGGTCAAGTTTCTATGCAGCGAAGAAGCCCGTGAGTTGAAGGGGCATATCTGGAAGATGATGGAGTTGGCTAGTACTCCAAATATAGTGGACTTCTATCCATTTTTGGATGGGATGGATATTCAGGGTCTAAACAAAAAGTCGTTGGAGTTCCGTAATCGATTAATCAGAGTGTGGGAAAGTGTTGTCAAGGAAAGAAGAGAGAAGCCGAGATCAGAATCAGATGAGAAACATCCTGACTTTTTGGATGTCATGCTTCAAAATGATTTATCAGATGAAAAAATCAATCCTATGGCCTCTAAGTTGTATATTGCAGGAACTGACACTACCACATCAACTGTTGAATGGGTCATGGCGGAGCTAATAAGGAGTAAGGAAACAAGGAACAAAGTTCAAGAAGAGCTTATTATAAGAAAAGAATTGAACTATGATAAATCTGAACTTTCATACCTTCAAATGTGTGTAAGAGAAACAATAAGGTTGCACCCACCGGCCCCGCTTCTCATCCCTCACCGAGCCATTGAAACCTGTCAAGTTATGAACTATAAGATTCCAAAAAATACAAAGGTGTTGGTGAATGCGTGGGCCATGGGGAGAGACCCCACTATTTGGGAAGATCCATTGTCGTTCAGACCAGAAAGGAGAATATGTCCTGGCCTTCCCATGGCTACTAAGACTGTGGAGTTAATCCTAGCTACTTTGATTCATTACTTCGATTGGTCTCTTCCGAGCAGTCAGTGTCCGGGGGAGCTAGATATGAACGAAAAAGTTGGTGTGACAATGCAGAAGGAAAAACCACTTCTCCTTATACCAAAGCTAAGAGTCCCCATTATAGCATATAAGTTAGCACCTTTATCTTGGTAA 1194 43.22 MKKFPIAMAKFSKLFGPLMSLKLGTQLVVVASSPRAAVEILKTHDRLLSGRHAPRLRPIKDVDDYTTFSLIWAHECHDNWKLLRSLCRTELFSPRAIEQQGSTRQRKMDEMVKFLCSEEARELKGHIWKMMELASTPNIVDFYPFLDGMDIQGLNKKSLEFRNRLIRVWESVVKERREKPRSESDEKHPDFLDVMLQNDLSDEKINPMASKLYIAGTDTTTSTVEWVMAELIRSKETRNKVQEELIIRKELNYDKSELSYLQMCVRETIRLHPPAPLLIPHRAIETCQVMNYKIPKNTKVLVNAWAMGRDPTIWEDPLSFRPERRICPGLPMATKTVELILATLIHYFDWSLPSSQCPGELDMNEKVGVTMQKEKPLLLIPKLRVPIIAYKLAPLSW 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3592009 3593470 - Conep05aG0086400.1 Cone5ag0838 437856

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0838 397 PRINTS E-class P450 group I signature 262 280 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PRINTS E-class P450 group I signature 327 350 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PRINTS E-class P450 group I signature 204 221 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PRINTS E-class P450 group I signature 224 250 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PRINTS E-class P450 group I signature 317 327 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PRINTS E-class P450 group I signature 12 31 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PRINTS P450 superfamily signature 263 274 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PRINTS P450 superfamily signature 215 232 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PRINTS P450 superfamily signature 318 327 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 116 - -
Cone5ag0838 397 Gene3D Cytochrome P450 1 385 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 Pfam Cytochrome P450 7 115 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 Pfam Cytochrome P450 113 376 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0838 397 SUPERFAMILY Cytochrome P450 4 384 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0838 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone5ag0838 Cone-Chr5:3592009 Cone8ag0079 Cone-Chr8:420522 2.19E-218 dispersed
Cone1ag1131 Cone-Chr1:55597210 Cone5ag0838 Cone-Chr5:3592009 2.19E-236 wgd
Cone12ag0360 Cone-Chr12:2026261 Cone5ag0838 Cone-Chr5:3592009 1.97E-46 wgd
Cone14ag0107 Cone-Chr14:497492 Cone5ag0838 Cone-Chr5:3592009 5.71E-39 wgd
Cone15ag0105 Cone-Chr15:510838 Cone5ag0838 Cone-Chr5:3592009 1.62E-23 wgd
Cone5ag0838 Cone-Chr5:3592009 Cone8ag0368 Cone-Chr8:2174104 4.02E-52 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g606 . Blo15g00156 . . Bpe03g00135 Bpe07g00949 Bma10g01211 . . . . . . . . . . . . . . . . . Cla01g00545 . . . . . . . Cone5ag0838 . . . Csa05g00580 Chy09g00925 . Blo07g00422 Blo09g00081 Bda06g00671 . . . . . . . . . . . . . . . . . . . . . . . . . . . . Lsi09g00589 . . Cme09g01454
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0000969 6 2 3 2 3 2 1 3 3 2 3 2 1 1 1 2 2 11 1 3 2 3 2 3 3 3 0 2 4 4 80