Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0871 ATGCAGAAGTCATTATTATTGCTCGAATTACCCATTTTGCCCTCCAATCTTTATTCATTTTATCCTAGCGTGATTAGACCAGAAAGCAGAGGAACGACTAAAAAGAAGAGTAAAGCGAGGGAGAGGAATATGCTCACAACTAGTACAAGTAGAAGTAGTACTGGTTGTATTAAGGTCAGGGCGATGCCTTCCGAAGCTGCTATTGGTGCTGGTGGCGGCGGTGGTGGTGGTGACGATAGTGGAGCTCTCCGTAACTGCAAGCTGAACGAGTCAACTTTCTTAGCATCACTGATGCCCAAGAACGAGATCGGGGCCGACCGGTTCATTGAAGCTCATCCGGAGCTCGATGGACGTGGAGTTGTAATCGCGATTTTTGATTCTGGTGTGGATCCAGCTGCTGCTGGATTACAAGTGACGTCTCATGGAAAACCAAAAGTCTTAGATGTACTTGATTGTACCGGAAGTGGAGATGTTGATACCTCAAAAGTGGTGAAGGCTGATGCAGATGGTTGCATTCTTGGCGCTTCAGGTGCTTCTCTGGTAGTCAATTCTTTGTGGGGGAATCCTTCCGGTGACTGGCATGTGGGTTATAAATTGGTATATGAATTGTTTACAGACACATTGACTTCTCGTTTGAAGAAAGAAAGAAGGAAAAAGTGGGATGAGGGAAACCAGGAGGAGATAGCTAAGGCTTTAAGGCATCTTCAAGAATTTGACCAGAAACACATCAAAGTGGAGGATGCACAGCTGAAAATGGTTCGTGAAGACCTCCAAAATAGAGTTGATATTCTACGTAAACAATCTGATAGTTATGATGACAAGGGGCCTGTTATTGATGCTGTTGTTTGGCATGATGGAGAAGTATGGAGGGCTGCTATTGACACACAGGGCCTTGTGGACGAGCCGGATAGTGGGAAACTTGCTAATTTTGTGCCCCTAACTAATTACAGGATTGAGCATAAATATGGTGTGTTTAGCAAGTTCGATGCCTGTTCATTTGTTCTTAATGTGTATGATGAGGGAAATGTATTAAGTATCGTGACAGATAGCTCCCCTCATGGCACTCATGTTGCTGGTATTGCTACTGCTTTCCACCCAGAGGAACCTCTATTGAATGGAATAGCACCTGGAGCACAGTTAATATCATGTAAAATTGGAGACTCACGCTTAGGTTCAATGGAGACTGGAACTGGCTTGACACGAGCGCTGATAGCCGCTGTGGAGCATAAATGCGATCTCATCAACATGAGTTATGGCGAACCAACATTACTTCCAGACTATGGTCGCTTCGTTGATCTTGTTAATGAAGTGGTAAACAAGCACCGCATAATCTTCATCAGTAGTGCTGGAAATAGTGGGCCAGCCTTGAACACTGTAGGTGCACCTGGTGGTACTACTTCAAGTATCATAGGTATTGGTGCATATGTCTCTCCCGCAATGGCTGCAGGGGCTCATTGTGTAGTTGAACCTCCTACTGAAGGGCTCGAATATACATGGTCAAGCCGTGGACCAACATCTGATGGAGATCTTGGTGTATGTGTTAGTGCTCCCGGTGGGGCTGTTGCTCCTGTTCCTACATGGACCCTTCAACGTCGTATGCTTATGAATGGGACATCGATGTCGTCTCCATCTGCTTGTGGTGGAGTTGCATTAATTCTAAGTGCGATGAAGGGTGAGGATATTACAGTGAGCCCATACACTGTGAGGAAGGCTCTGGAAAATACTTCTATTCCGATAGGTGATTTGTTGGAAGATAAATTGTCTACTGGACATGGACTTATGCAAGTTGACAAGGCACATGCATATATACAGAAGTGCCAGAATGTTCCATGTGTTTGGTATCAACTAAAAATCAATCAATCTGGAAAATCTTCTCCTACATCACGGGGCATCTACTTAAGGGAGGCTGGTGCTTGTCGAAAATCCACAGAGTGGACTGTGCAAGTCGAGCCTAAATTTCACGAAGGTGCTAGTAATTTAGAGGAGTTGGTTCCTTTCGAGGAGTGCATAGAGTTACATTCCAGCGACAAGGCAGTTGTCAGGGCACCTGATTACTTACTTCTCAATCATAATGGGCGTAGCTTCAATATAGCTGTCGATCCTATGCATCTTACTGAGGGTCTGCACTACCATGAACTGTATGGAGTTGATTGCAAAGCTCCATGGCGTGGTCCACTTTTTAGAATCCCAATTACCATAACAAAGCCAATGGCAGTAGTCACCCGACCTCCATTAGTTTCTTTTCAAAGGATGTGCTTTCTACCTGGTCACATTGAGAGGAGATTCATAGAAGTGCCACTTGGTGCTAGTTGGGTTGAAGCTACCATGCAAACGTCTGGATTTGACACATCAAGAAGATTTTTCATTGCCACTGTCCAGATCTCACCATTGGAAAGGCCTATCAAGTGGGAGAAGGTTGTAACGTCTTCCTCTCCTTCTGCCAAAAGTTTCTCCTTTCCAGTTGTGGGTGGTCAGACCATGGAATTAGTGATTGCTCAATTTTGGTCAAGCGGTAGAGGAAGTCCGGATACAACCATTGTGGATTTTGAGATTGCATTTCATGGGATAAACATTAACAAAGAGGAAGTAGTGCTTGATGGAAGTGAAGCACCCATTAGAATCGACGCTGAGGCTCTATTGGCATCTGAGAAACTTGCACCTGCAGCTATCCTGAATAAGATAAGGATTCCATATCGCCCCATCGATGCTAAACTTTGTACTTTACCAACAAATCGCGACAAACTACCCTCAGGCAAACAGATTTTGGCACTGACATTAACCTACAAATTTAAATTAGACGATGGTGCTGAAGTAAAACCTCGAGTTCCATTGCTCAACAACCGTGTATACGATAATAAATTTGAGTCACAGTTTTATATGATTTCTGACTCAAATAAGCGAATCTATGCTACGGGGGATATCTATCCAAGTTCCTCGAAACTTCCTAAGGGAGAATACACTTTACAGCTATATATAAGGCATGAGAATGTGCAGTATTTGGAAAAAATGAAGCAGTTGGTGTTATTCATAGAAAGAAATTTAGAAGAGAAGGATGTCATTAAGTTGAGCTTCTTCTCTCAACCTGATGGTCCAGTGATCGGTAATGGTGCATTTAAATCTTCAGAATTAGTGCCAGGGAAAAAAGAAGCATTTTATTTGGGCCCACCATCTAAAGACAAGCTGCCAAAGAGTTCCCCTCAAGGATCTGTTTTGTTGGGAGCAATCTCTTATGGTAAACTGTCACTTGGTGGCGAAGAAGGGAAAAATCCACAGAAGAACCCCGTATCATATCAAATTTCTTACATAGTGCCACCAAACAAGCTTGATGATGATAAGGGAAAAGGTTCTTCTACACCTTCCACTAAGACCGTTAGTGAAAGATTGGAAGAAGAGGTTCGAGATGCAAAGATAAAAGTCCTTGTAAGTCTTAAGCAAGAAACTGATGAAGAGCGCACTGAATGGAAAAAACTCTCTCTTTCTCTTAAGTCTGAATATCCAAAGTACACTCCATTGTTAGCAAAATTTTTGGAAGGTTTCATTTCTCAGAGTAAGGTTGAGGACAAAATTCGCTACCACGAAGAGGTTATTGATGCAGCAAATGAAGTGGTTGATAGTATAGACAGAGAGGAGTTGGCAAAATATTTGGCACTCAGAAGCGACCCGGAAGATGAAGAGTCAGAGAAAACCAAGAAAAAGATGGAAACAACTCGTGATCAGTTGGCAGAGGCACTGTATCAAAAGGGATTAGCACTGGAAGAAATTGAAACCATAAAGGGTGAGAAGGTTCCAGAATCAGCTGCAACTGCATCCAACTCCAAGGCACAGCCAGACTCGTTTGAAGAGAACTTTAAAGAATTGAAAAAATGGGTAGATGTGAAGTCTTCCAAATATGGAACTCTCTGTGTATTACGTGAGAAACGAAGTGGAAGGCTTGGAACAGCACTGAAGGTATTGAATGACATTATTCAAGATGATGGTGAGCTTCCTAAGAAGAAGCTCTATGAACTCAAACTCTCTTTGCTTGACGAAATTGGGTGGACCCACTTGGCCTCATATGAGAGACACTGGATGCATGTACGCTTCCCAGCAAGTTTGCCTCCGTTTTAG 4107 43.22 MQKSLLLLELPILPSNLYSFYPSVIRPESRGTTKKKSKARERNMLTTSTSRSSTGCIKVRAMPSEAAIGAGGGGGGGDDSGALRNCKLNESTFLASLMPKNEIGADRFIEAHPELDGRGVVIAIFDSGVDPAAAGLQVTSHGKPKVLDVLDCTGSGDVDTSKVVKADADGCILGASGASLVVNSLWGNPSGDWHVGYKLVYELFTDTLTSRLKKERRKKWDEGNQEEIAKALRHLQEFDQKHIKVEDAQLKMVREDLQNRVDILRKQSDSYDDKGPVIDAVVWHDGEVWRAAIDTQGLVDEPDSGKLANFVPLTNYRIEHKYGVFSKFDACSFVLNVYDEGNVLSIVTDSSPHGTHVAGIATAFHPEEPLLNGIAPGAQLISCKIGDSRLGSMETGTGLTRALIAAVEHKCDLINMSYGEPTLLPDYGRFVDLVNEVVNKHRIIFISSAGNSGPALNTVGAPGGTTSSIIGIGAYVSPAMAAGAHCVVEPPTEGLEYTWSSRGPTSDGDLGVCVSAPGGAVAPVPTWTLQRRMLMNGTSMSSPSACGGVALILSAMKGEDITVSPYTVRKALENTSIPIGDLLEDKLSTGHGLMQVDKAHAYIQKCQNVPCVWYQLKINQSGKSSPTSRGIYLREAGACRKSTEWTVQVEPKFHEGASNLEELVPFEECIELHSSDKAVVRAPDYLLLNHNGRSFNIAVDPMHLTEGLHYHELYGVDCKAPWRGPLFRIPITITKPMAVVTRPPLVSFQRMCFLPGHIERRFIEVPLGASWVEATMQTSGFDTSRRFFIATVQISPLERPIKWEKVVTSSSPSAKSFSFPVVGGQTMELVIAQFWSSGRGSPDTTIVDFEIAFHGININKEEVVLDGSEAPIRIDAEALLASEKLAPAAILNKIRIPYRPIDAKLCTLPTNRDKLPSGKQILALTLTYKFKLDDGAEVKPRVPLLNNRVYDNKFESQFYMISDSNKRIYATGDIYPSSSKLPKGEYTLQLYIRHENVQYLEKMKQLVLFIERNLEEKDVIKLSFFSQPDGPVIGNGAFKSSELVPGKKEAFYLGPPSKDKLPKSSPQGSVLLGAISYGKLSLGGEEGKNPQKNPVSYQISYIVPPNKLDDDKGKGSSTPSTKTVSERLEEEVRDAKIKVLVSLKQETDEERTEWKKLSLSLKSEYPKYTPLLAKFLEGFISQSKVEDKIRYHEEVIDAANEVVDSIDREELAKYLALRSDPEDEESEKTKKKMETTRDQLAEALYQKGLALEEIETIKGEKVPESAATASNSKAQPDSFEENFKELKKWVDVKSSKYGTLCVLREKRSGRLGTALKVLNDIIQDDGELPKKKLYELKLSLLDEIGWTHLASYERHWMHVRFPASLPPF 1368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3709499 3725969 - Conep05aG0089700.1 Cone5ag0871 437889

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0871 1368 ProSiteProfiles Serine proteases, subtilase domain profile. 91 600 - -
Cone5ag0871 1368 MobiDBLite consensus disorder prediction 28 52 - -
Cone5ag0871 1368 ProSitePatterns Serine proteases, subtilase family, serine active site. 537 547 IPR023828 -
Cone5ag0871 1368 PRINTS Subtilisin serine protease family (S8) signature 536 552 IPR015500 -
Cone5ag0871 1368 PRINTS Subtilisin serine protease family (S8) signature 349 362 IPR015500 -
Cone5ag0871 1368 PRINTS Subtilisin serine protease family (S8) signature 117 136 IPR015500 -
Cone5ag0871 1368 CDD Peptidases_S8_Tripeptidyl_Aminopeptidase_II 97 579 IPR034051 GO:0006508(InterPro)|GO:0008240(InterPro)
Cone5ag0871 1368 SUPERFAMILY Subtilisin-like 99 610 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone5ag0871 1368 Coils Coil 254 274 - -
Cone5ag0871 1368 Gene3D - 614 744 IPR046940 -
Cone5ag0871 1368 Pfam Tripeptidyl-peptidase II, first Ig-like domain 627 733 IPR048383 -
Cone5ag0871 1368 ProSitePatterns Serine proteases, subtilase family, histidine active site. 353 363 IPR022398 -
Cone5ag0871 1368 FunFam Tripeptidyl-peptidase 2 homolog 277 610 - -
Cone5ag0871 1368 PANTHER PEPTIDASE S8 208 1050 IPR050131 GO:0005829(PANTHER)|GO:0008240(PANTHER)
Cone5ag0871 1368 MobiDBLite consensus disorder prediction 1105 1125 - -
Cone5ag0871 1368 Pfam TPPII, galactose-binding domain-like 753 837 IPR048384 -
Cone5ag0871 1368 Pfam Tripeptidyl peptidase II 879 1064 IPR022229 -
Cone5ag0871 1368 Gene3D - 1122 1368 IPR046939 -
Cone5ag0871 1368 FunFam Tripeptidyl-peptidase 2 613 744 - -
Cone5ag0871 1368 Gene3D Peptidase S8/S53 domain 271 610 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone5ag0871 1368 Gene3D Peptidase S8/S53 domain 100 194 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
Cone5ag0871 1368 Gene3D - 215 270 - -
Cone5ag0871 1368 Pfam Subtilase family 117 580 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0871 K01280 - - mdm:103439777 2103.95
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g697 Blo06g01128 . . . . . . . . . . Cma15g01096 . Car15g01007 . . . . . . . . . . Cla01g00436 . . Cco01g0470 . . Cre09g2075 . Cone5ag0871 . . . . . . . . . Bda15g00725 . . Bma08g00301 . . . Cmo15g01154 . . . . . Cpe13g00255 Bhi12g00508 . . . . . Lcy12g0027 . . . . . . . . . . Cme09g01554
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0005749 1 1 2 3 0 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 2 2 1 2 36