Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0905 ATGGGAGGATGGCTTAGTGATAATGGTCATGGCTGTGTTTGCATGGGAACCCAGTTGATCGGTCTGGGTTCAAGATTGTTGGCAAGTGAAGAAGAAGAAAACAGAGCATGGGTTTCTGATAACTCAACCTTTGCATTTGGGTTCACTCCATTAACTCAATCTTCTCATCAGTTTCAGTTAGCCATTTGGCTTGCCCACCTTCCTGGAGATACAAGTCTTGTTTGGTCGGCTAAAAGAAACTCTCCGGTGACGAAGGATGCGATCGTAGAGCTGGACAGGACCGGAAACTTAGTCCTCACTGACGGAGACGCCACCATATGGGCTTCAAACACCTCCGGCGCGGGGGTCCAGTTCGCCGTCATGTCCGAAACCGGAAACTTTATCCTCTTCAACTCAGACAACCGTCCTCTCTGGCAAAGCTTTTCACATCCATCGGACACTCTTCTCCCGAACCAGCCATTGTCCGTTTCTTTAGAGCTCACAAGCACTCCGAAATCACCCTCCCATGGCGGATACTTCTCATTAGAGATGCTCCAGCAACCCACTTCCTTAAGCCTTGCGTTGACCTTCAACTTGCCCGATCATGAAAGCTTCGCAAATTATTCGTACTGGTCTGGACCTGATATATCGAACGTTACAGGAGATGTTATTGCAGTTTTAGATGAAGCAGGGAGCTTTGGAATTGTCTACGGCGATTCTTCAGATGGAGCAGTGTATGTTTATAAAAATGATTTGGATAATGGAGGGTTATCTAAACCAGAAAATAAGTCCCTTTCAACACGACTATCAACTGTTCGACGGCTTTCCCTAGAAAGTAACGGGAATTTACGGTTATACCGTTGGGACGATGATGTTAACGGGTCCCGCCAGTGGGTCCCGGAATGGGCAGCCGTGTCTAATCCATGCACTATTGCTGGAACTTGTGGTAATGGAATATGTAGATTGAACGGGAGCAAAACCAATGCTTCTTGTTTGTGCTTGCCTGGAACTTCTAAGGATGATGGTAATGATGGCATATGCGTTGAGAATAATTCATCATCTTTGATCGGGAAATGTGATTTATCGGAGAGCGAGAACCGATCCATGGATTTTAGAATGGCAGTGGTGCAGCAAACAAATTACTATTTCTCTGAGGTTTCTGTGATTGTGAATTATAGTGATATTGATTCTGTATCTAAATGTGGGGATGCTTGTTTATCGAATTGTGAATGTGTTGCTTCTGTTTATGGGCTTGATGACGAGAAAGCCGTTTGTTGGGTGTTAAGGAGCTTGGATTTTGGTGGGTTTGAGGACCCAAGTTCCACCCTTTTTGTGAAAGCTAGATCCAATGGATCTAATAGTGATAATGGAGGAGGAGGATCTGATGATGGTAAGGATTCTTCAAAAGGAGGATTAGGGAATGGGAGAGCGAAGGTTGTGGTTATTCCAATTGTGTTAAGCATGACTTTTCTTACCGTGCTACTTTGCCTTTTGCTGTATTACAATGTTCATAGGAGGAGGGAAATGAGAAGAGCTTTGGAGCACTCTTTGATCCTGTCTGGTGCTCCCTTGAGTTTCACTTACCGGGATTTGCAAATTCGAACAAGTAATTTTTCCCAGCTGCTTGGAACAGGCGGATTTGGGAGTGTGTATAAGGGAAGCCTTGGAGATGGGACTTTAATTGCAGTAAAGAAACTTGAGAGAGTTTTTCCTCATGGCGAGAAGGAATTCATCACTGAAGTTAACACTATAGGATCAATGCATCATATGAATTTAGTCCGTCTTTGTGGATACTGCTCTGAGGGATCTCAGAGGCTGCTTGTTTACGAGTTCATGAAAAATGGATCACTAGATAAATGGATCTTCTCATCATATCAAAGTGGAGATAGAGTCTTAGACTGGGCATCTAGGTTTCAAATAGCAATAGCCACATCACAAGGGATTGCTTATTTCCACGAACAATGTAGGAATAGAATCATACACTGTGACATAAAGCCGGAAAACATATTACTGGACGAAAACTTCTGTCCAAAAGTATCCGATTTTGGGCTGGCAAAGCTCATGGGAAGAGAACATTCCCATGTTGTAACTATGGTTAGAGGAACTAGAGGATATTTAGCTCCTGAGTGGGTCAGTAATCGCCCTATTACTGTAAAAGCCGATGTTTATAGCTATGGAATGCTTCTTCTGGAGATTATTGGTGGCAGGAGAAACCTTGACATGTCTTATGATGCAGAAGACTTCTTCTATCCCGGCTGGGCCTTTAAGGGGATGATAAGTGGGACCTTATTGAAAGTTGCAGATAGGAGACTAAATGGTGCAGTAGATGAAGAAGAGTTGAAGAGAGCTTTAAAAGTTGCATTTTGGTGCATTCAAGACGAGGTGTCAATGAGACCAACAATGGGGGAAGTGGTGAAGATGTTGGAAGGATCGGTTGATACGATTAATACTCCGCCAATGCCGCAAACGGTACTGGAATTGATCGAGGAAGGTTTGGAATGCGTATATAGAGCCATGAAAGGGGACTGTACTCAGTTTAGTTCCTTCACTGTAAATAGTACAATTCATCCTTCTTCTCGTGCTACATGTAGTTACTCCACCATGTCTCCTAGATAA 2595 43.66 MGGWLSDNGHGCVCMGTQLIGLGSRLLASEEEENRAWVSDNSTFAFGFTPLTQSSHQFQLAIWLAHLPGDTSLVWSAKRNSPVTKDAIVELDRTGNLVLTDGDATIWASNTSGAGVQFAVMSETGNFILFNSDNRPLWQSFSHPSDTLLPNQPLSVSLELTSTPKSPSHGGYFSLEMLQQPTSLSLALTFNLPDHESFANYSYWSGPDISNVTGDVIAVLDEAGSFGIVYGDSSDGAVYVYKNDLDNGGLSKPENKSLSTRLSTVRRLSLESNGNLRLYRWDDDVNGSRQWVPEWAAVSNPCTIAGTCGNGICRLNGSKTNASCLCLPGTSKDDGNDGICVENNSSSLIGKCDLSESENRSMDFRMAVVQQTNYYFSEVSVIVNYSDIDSVSKCGDACLSNCECVASVYGLDDEKAVCWVLRSLDFGGFEDPSSTLFVKARSNGSNSDNGGGGSDDGKDSSKGGLGNGRAKVVVIPIVLSMTFLTVLLCLLLYYNVHRRREMRRALEHSLILSGAPLSFTYRDLQIRTSNFSQLLGTGGFGSVYKGSLGDGTLIAVKKLERVFPHGEKEFITEVNTIGSMHHMNLVRLCGYCSEGSQRLLVYEFMKNGSLDKWIFSSYQSGDRVLDWASRFQIAIATSQGIAYFHEQCRNRIIHCDIKPENILLDENFCPKVSDFGLAKLMGREHSHVVTMVRGTRGYLAPEWVSNRPITVKADVYSYGMLLLEIIGGRRNLDMSYDAEDFFYPGWAFKGMISGTLLKVADRRLNGAVDEEELKRALKVAFWCIQDEVSMRPTMGEVVKMLEGSVDTINTPPMPQTVLELIEEGLECVYRAMKGDCTQFSSFTVNSTIHPSSRATCSYSTMSPR 864
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3880989 3883924 + Conep05aG0093100.1 Cone5ag0905 437923

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0905 864 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 605 812 - -
Cone5ag0905 864 Pfam D-mannose binding lectin 73 158 IPR001480 -
Cone5ag0905 864 MobiDBLite consensus disorder prediction 440 463 - -
Cone5ag0905 864 Gene3D - 28 143 IPR036426 -
Cone5ag0905 864 FunFam Serine/threonine-protein kinase 21 142 - -
Cone5ag0905 864 Pfam Protein kinase domain 532 799 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0905 864 CDD STKc_IRAK 535 803 - -
Cone5ag0905 864 FunFam serine/threonine-protein kinase PBS1-like 497 604 - -
Cone5ag0905 864 ProSitePatterns Protein kinases ATP-binding region signature. 535 558 IPR017441 GO:0005524(InterPro)
Cone5ag0905 864 SMART serkin_6 529 801 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cone5ag0905 864 Pfam S-locus glycoprotein domain 260 330 IPR000858 GO:0048544(InterPro)
Cone5ag0905 864 CDD B_lectin 34 144 IPR001480 -
Cone5ag0905 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 652 664 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cone5ag0905 864 Gene3D Transferase(Phosphotransferase) domain 1 605 816 - -
Cone5ag0905 864 SUPERFAMILY alpha-D-mannose-specific plant lectins 73 160 IPR036426 -
Cone5ag0905 864 MobiDBLite consensus disorder prediction 440 454 - -
Cone5ag0905 864 PIRSF SRK 11 848 IPR024171 GO:0004674(InterPro)
Cone5ag0905 864 PANTHER OS07G0415500 PROTEIN 31 832 - -
Cone5ag0905 864 Gene3D Phosphorylase Kinase; domain 1 494 604 - -
Cone5ag0905 864 SUPERFAMILY Protein kinase-like (PK-like) 510 802 IPR011009 -
Cone5ag0905 864 ProSiteProfiles Bulb-type lectin domain profile. 23 142 IPR001480 -
Cone5ag0905 864 SMART blect_4 28 144 IPR001480 -
Cone5ag0905 864 ProSiteProfiles Protein kinase domain profile. 529 805 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0905 - - - - 0.0
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone4ag0691 Cone-Chr4:3456765 Cone5ag0905 Cone-Chr5:3880989 4.06E-89 dispersed
Cone4ag1231 Cone-Chr4:10246847 Cone5ag0905 Cone-Chr5:3880989 6.28E-134 dispersed
Cone4ag1783 Cone-Chr4:12996990 Cone5ag0905 Cone-Chr5:3880989 3.04E-136 dispersed
Cone5ag0677 Cone-Chr5:2887724 Cone5ag0905 Cone-Chr5:3880989 1.85E-72 dispersed
Cone5ag0905 Cone-Chr5:3880989 Cone7ag1698 Cone-Chr7:11318915 4.22E-132 dispersed
Cone1ag1203 Cone-Chr1:55909891 Cone5ag0905 Cone-Chr5:3880989 0 wgd
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi16g814 . . . . . . . . . . . . . . . . . Bhi01g01426 . . . . . . . . . . . . . Cone1ag1203 Cone5ag0905 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Csa03g02176 . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0008718 0 4 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 2 2 35
       

Regulatory proteins

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
82854 PF14432 DYW_deaminase 4.50E-45 CL0109 Cone PK