Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0921 ATGGCTACAAGTTTCACTCTGCTTCAAACCATTTCTTCATTCTCAACCCAATCAGCCTTCCAACCTAAATTTCACTCCTACGCATTAAAACCCACTCGGCCGTTTTCTAATTTGTGCCATCCACCGAGGCTGAAAGGAACGTCTGGTTTATGTATAATTAAATGTACTTCTTCAAATGGGCAAGAGCCTGAGCCGGTGGAGAATGGGGTTAAGAGCGTGGAAAAGCTTCTCGAAGAGAAGCGGCGAGCCGAGCTGTCTGCTCGGATTGCCTCTGGAGAATTCACTGTCAATCAATCTGGTTTTCCATCTCTGCTGAAGAATGGCTTGTCAAAGCTGGGCCTTCCAGACAAGGTTCTGAATGTAATATTCAGTTGGGTTGATGGCAATGAAGACTATCCCAAAATCCCAGAAGCCAAAGGGGCAATTAGTGCAATTCGTAGTGAAGCTTTCTTCTTACCATTGTATGAGCTCTTTCTCACGTATGGTGGTATATTCAGGTTGAATTTTGGGCCAAAGTCATTTCTGATAGTTTCTGATCCTTCCATTGCTAAACATATATTAAAGGACAATTCAAAGGCCTATTCCAAGGGTATTTTGGCTGAAATTTTAAATTTTGTGATGGGGACTGGACTCATCCCAGCTGATGGGGAAATTTGGCGTGCTCGTCGAAGAACTATAGTCCCCGCATTGCATCTCAAGTATGTAGCAGCTATGATCAATCTTTTCGGACAAGCTACAGATAGGCTTTGCAGTAAGCTAGATGCTGCTGCATCTGATGGAGAAGATGTAGAGATGGAGTCTCTTTTTTCCCGTTTGACTTTGGATATCATTGGCAAAGCTGTATTTAACTATGATTTTGATTCATTGACCAATGATACTGGAATTGTCGAGGCTGTTTATACTGTCCTGAGAGAAGCAGAAGATAGAAGTACTGCACCAATTCCTGTTTGGGAAATTCCCATATGGAAGGATATTTCACCACGACAAAGAAAAGTCTCTGCTGCACTTAAAATAATTAACGACACACTAGATAATCTCATAGCTATATGCAAGAGGATGGTTGATGAAGAAGAGTTACAGTTTCACGAGGAATACATGAATGAACAAGATCCAAGCATACTTCACTTCCTTTTGGCTTCAGGCGATGATGTTACAAGCAAGCAACTTAGAGATGATTTGACCACGATGCTTATAGCCGGGCACGAGACATCAGCCGCAGTCTTAACATGGACCTTTTATCTTCTCTCCAAGGAACCAAGGGTGGTGGCCAAGCTTCAAGAGGAGGTTGATTCGGTTCTAGGTGATAGGTTTCCTACTATTGAGGATATGAAGAAGCTCAAATATACAACTCGAGTAATCAATGAAGGTCTGAGGCTTTACCCGCAGCCACCAGTGTTGATACGCCGATCTATTGAGAATGACACATTGGGAAAGTACCCAATCAAAAGGGGCGAGGATATTTTTATTTCCGTATGGAATCTGCATCGCAGTCCGAAACATTGGGAGGATGCAGATAAGTTCAACCCCGAAAGATGGCCGTTAGATGGACCCAATCCGAATGAGACAAACCAAAATTTCAGTTACTTACCCTTCGGCGGAGGGCCACGGAAATGTGTAGGGGACATGTTTGCTTCATATGAGACTGTAGTAGCACTTGCATTGCTTATTCGTCGGTTTAACTTTCAACTAGCGGTTGGAGCACCTCCGGTAGAGATGACTACAGGAGCAACGATTCACACAACGCAAGGGTTGACGATGACTGTAACAAGAAGAGAGAGACCCATCGTTATACCCACATTGGAAGCCAATGATTCTTCTTCATCTTCTATACCTGTCTTGAATACGGACCCACTCCTTGTTCGGAAAGGGCAAGTTTCCTCTGCTCAGTCCTAA 1893 43.53 MATSFTLLQTISSFSTQSAFQPKFHSYALKPTRPFSNLCHPPRLKGTSGLCIIKCTSSNGQEPEPVENGVKSVEKLLEEKRRAELSARIASGEFTVNQSGFPSLLKNGLSKLGLPDKVLNVIFSWVDGNEDYPKIPEAKGAISAIRSEAFFLPLYELFLTYGGIFRLNFGPKSFLIVSDPSIAKHILKDNSKAYSKGILAEILNFVMGTGLIPADGEIWRARRRTIVPALHLKYVAAMINLFGQATDRLCSKLDAAASDGEDVEMESLFSRLTLDIIGKAVFNYDFDSLTNDTGIVEAVYTVLREAEDRSTAPIPVWEIPIWKDISPRQRKVSAALKIINDTLDNLIAICKRMVDEEELQFHEEYMNEQDPSILHFLLASGDDVTSKQLRDDLTTMLIAGHETSAAVLTWTFYLLSKEPRVVAKLQEEVDSVLGDRFPTIEDMKKLKYTTRVINEGLRLYPQPPVLIRRSIENDTLGKYPIKRGEDIFISVWNLHRSPKHWEDADKFNPERWPLDGPNPNETNQNFSYLPFGGGPRKCVGDMFASYETVVALALLIRRFNFQLAVGAPPVEMTTGATIHTTQGLTMTVTRRERPIVIPTLEANDSSSSSIPVLNTDPLLVRKGQVSSAQS 630
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 3943056 3947172 - Conep05aG0094700.1 Cone5ag0921 437939
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0921 630 Pfam Cytochrome P450 148 573 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS E-class P450 group I signature 158 177 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS E-class P450 group I signature 450 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS E-class P450 group I signature 538 561 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS E-class P450 group I signature 528 538 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS E-class P450 group I signature 408 434 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS E-class P450 group I signature 388 405 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS E-class P450 group I signature 490 514 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 SUPERFAMILY Cytochrome P450 147 591 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 531 540 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
Cone5ag0921 630 PRINTS P450 superfamily signature 399 416 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS P450 superfamily signature 451 462 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS P450 superfamily signature 538 549 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PRINTS P450 superfamily signature 529 538 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 PANTHER CYTOCHROME P450 FAMILY 4 146 572 IPR050196 GO:0009507(PANTHER)|GO:0010291(PANTHER)|GO:0016123(PANTHER)
Cone5ag0921 630 FunFam Carotene epsilon-monooxygenase, chloroplastic 136 593 - -
Cone5ag0921 630 Gene3D Cytochrome P450 133 606 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
Cone5ag0921 630 CDD CYP97 152 584 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag0954 Cone-Chr14:7697292 Cone5ag0921 Cone-Chr5:3943056 7.07E-148 dispersed
Cone5ag0921 Cone-Chr5:3943056 Cone16ag0447 Cone-Chr16:6794234 3.17E-33 dispersed
Cone10ag0202 Cone-Chr10:1002337 Cone5ag0921 Cone-Chr5:3943056 4.59E-113 transposed
Cone12ag0180 Cone-Chr12:896310 Cone5ag0921 Cone-Chr5:3943056 1.35E-28 transposed
Cone4ag1668 Cone-Chr4:12507249 Cone5ag0921 Cone-Chr5:3943056 3.52E-24 transposed
Cone1ag1676 Cone-Chr1:57893978 Cone5ag0921 Cone-Chr5:3943056 5.92E-250 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0921 K15747 - csv:101215492 985.326