Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cone5ag0938 | ATGACCGGTAAGGCGAAGCCTAAGAAGCACACGGCCAAGGAGATCGCCGCCAAGGTCGACGCAGCGACCACCAACAGAGGCGGAGGAAAGGCCGGTTTAGCCGACCGGTCCGGTCTGGAAAAGGGTGGGCACGCCAAGTTTGAGTGCCCCCACTGCAAGGTCACCGCCCCTGACATCAAGACTATGCAGATTCATCATGAGTCGAAGCATCCAAGGATTCCTTACGAGGAAGACAAGGTTGTGAATCTTCATGCTGTTCGAGCTCCTGAGGCGATTAAGCCCAAGCCTGGTGTGAGGGGAAGCCTTAAGAAGTGA | 315 | 56.19 | MTGKAKPKKHTAKEIAAKVDAATTNRGGGKAGLADRSGLEKGGHAKFECPHCKVTAPDIKTMQIHHESKHPRIPYEEDKVVNLHAVRAPEAIKPKPGVRGSLKK | 104 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 4011942 | 4012739 | + | Conep05aG0096400.1 | Cone5ag0938 | 437956 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cone5ag0938 | 104 | MobiDBLite | consensus disorder prediction | 1 | 45 | - | - | |
| Cone5ag0938 | 104 | SUPERFAMILY | Expressed protein At2g23090/F21P24.15 | 29 | 77 | - | - | |
| Cone5ag0938 | 104 | PANTHER | GEO09665P1-RELATED | 1 | 83 | IPR045230 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cone1ag1692 | Cone-Chr1:57948472 | Cone5ag0938 | Cone-Chr5:4011942 | 9.38E-68 | wgd | |
| Cone10ag0604 | Cone-Chr10:2839418 | Cone5ag0938 | Cone-Chr5:4011942 | 1.80E-55 | wgd | |
| Cone3ag0630 | Cone-Chr3:3112399 | Cone5ag0938 | Cone-Chr5:4011942 | 2.69E-56 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cone5ag0938 | - | - | - | 0.0 |