Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag0943 ATGGGTTCCTGTTTATCAGCTGAATCTAGGAGCCCCATCCCTGGCTCTCCGGGATCTCCTTCCCTCGGATTCAAGAAGAGGAAAAATTCCAAGAAAAAGTTGGGGTCAAGAAATTCTTCTTTTGATCACAGAAAGGACGAACGGCGTCAACAAATTTCAGGGAGGATGTTCTTTAATGGTTCTAGTGAGGTTGCTGCTATGTTTACTCAACAGGGCAAGAAAGGGACTAATCAAGATGCCATGCTTGTTTGGGAGAATTTTGGCTCTAGAACGGACACTGTCTTCTGCGGAGTTTTTGATGGCCATGGTCCTTATGGTCATATGGTTGCAAAGAGGGTGAGGGATTCTCTTCCACTGAAACTGAGTGCACATTGGGAAGTCAATGCAACCAATGATGATGGTTGTAGAGAAAGTGGCCTTACTACAGGAAGCATGAACTCTGAAGATACTGCTTTTATATCTGCTGATGAAGATTCTAGAATCTCAATGGAAAGTGAGGAAGCAGATATGCGCCCGGATTTCTTTCAGACAATAAAAGAGTCATTTTTGAAGGCCTCTAAAGTCATGGACAGGGAATTGAGAATGAACCAAAGCATTGATTGTTTCTGTAGTGGGACCACAGCAGTAACTCTGGTTAAGCAGGGACGAGATGTTGTTGTTGGAAATGTTGGAGACTCCAGGGCTGTTCTGGGCACTAGAGATGAAAATGATTCTCTTATTGCAGTTCAGTTAACCGTGGATCTCAAGCCAAATCTTCCAGCGGAAGCAGAGAGAATCCGTAAATGTAGAGGCCGAGTTTTTGCTCTTCAAGACGAACCTGAGGTTGCTCGTGTTTGGTTGCCAAATTACAATTCGCCCGGACTTGCCATGGCTCGGGCCTTTGGAGATTTCTGCCTCAAGGATTTTGGCCTCATCTCCGTTCCTGAAGTATCTTATCGACGCCTCACTGACAAGGATGAATTCATCGTCCTGGCTACAGATGGAATTTGGGATGTTCTGTCGAATAAAGAGGTAGTAGACATTGTAGCATCGGCCCCGGCCCGTTCACATGCAGCTAGAGGGCTTGTTCAGTCCGCAATTAGAGCGTGGAAATGTAAATACCCAACTTCCAAGGTTGATGATTGTGCTGTAGTTTGTCTCTTTCTGGGCTCGAATGCGAACAGTTTGTTGTCTTCTGCTGCTTCTAGTACCAAAATCAAGGAGCAGATTATTACATCGGATGGAATGAATTCTACGACTACCATTGAGAAAGATAATGTTCCTGATCGCAAAGGTCCAGATCATCCAGGAACCGTAAGAGAGATTCTCCAGGAAGAAAGTGAAGGAGAATCGTTGATCGAGGAGGAAACGCATACAGAGGTGGGAACAGAGTGGTCTGCTCTGGAAGGAGTGTCTCGTGTCAACACATTAATAAATCTTCCGAGGTTTGTCCCCGGAAAGAATGAAAAGAAGGCACGGTGA 1461 45.24 MGSCLSAESRSPIPGSPGSPSLGFKKRKNSKKKLGSRNSSFDHRKDERRQQISGRMFFNGSSEVAAMFTQQGKKGTNQDAMLVWENFGSRTDTVFCGVFDGHGPYGHMVAKRVRDSLPLKLSAHWEVNATNDDGCRESGLTTGSMNSEDTAFISADEDSRISMESEEADMRPDFFQTIKESFLKASKVMDRELRMNQSIDCFCSGTTAVTLVKQGRDVVVGNVGDSRAVLGTRDENDSLIAVQLTVDLKPNLPAEAERIRKCRGRVFALQDEPEVARVWLPNYNSPGLAMARAFGDFCLKDFGLISVPEVSYRRLTDKDEFIVLATDGIWDVLSNKEVVDIVASAPARSHAARGLVQSAIRAWKCKYPTSKVDDCAVVCLFLGSNANSLLSSAASSTKIKEQIITSDGMNSTTTIEKDNVPDRKGPDHPGTVREILQEESEGESLIEEETHTEVGTEWSALEGVSRVNTLINLPRFVPGKNEKKAR 486
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4036801 4040881 + Conep05aG0096900.1 Cone5ag0943 437961
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag0943 486 MobiDBLite consensus disorder prediction 35 51 - -
Cone5ag0943 486 ProSiteProfiles PPM-type phosphatase domain profile. 64 382 IPR001932 -
Cone5ag0943 486 SMART PP2C_4 56 380 IPR001932 -
Cone5ag0943 486 Pfam Protein phosphatase 2C 173 361 IPR001932 -
Cone5ag0943 486 MobiDBLite consensus disorder prediction 1 16 - -
Cone5ag0943 486 FunFam probable protein phosphatase 2C 33 59 385 - -
Cone5ag0943 486 CDD PP2Cc 64 382 IPR001932 -
Cone5ag0943 486 PANTHER PROTEIN PHOSPHATASE 46 381 IPR015655 GO:0004722(InterPro)|GO:0004722(PANTHER)|GO:0006470(InterPro)|GO:0035970(PANTHER)
Cone5ag0943 486 SUPERFAMILY PP2C-like 60 383 IPR036457 -
Cone5ag0943 486 Gene3D - 59 383 IPR036457 -
Cone5ag0943 486 MobiDBLite consensus disorder prediction 1 51 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone12ag1441 Cone-Chr12:10420790 Cone5ag0943 Cone-Chr5:4036801 1.91E-139 dispersed
Cone3ag0822 Cone-Chr3:4221977 Cone5ag0943 Cone-Chr5:4036801 1.99E-102 dispersed
Cone4ag1650 Cone-Chr4:12437128 Cone5ag0943 Cone-Chr5:4036801 2.73E-96 dispersed
Cone5ag0943 Cone-Chr5:4036801 Cone8ag1481 Cone-Chr8:11312853 7.09E-136 dispersed
Cone1ag1702 Cone-Chr1:57974327 Cone5ag0943 Cone-Chr5:4036801 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag0943 - - - 0.0