Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cone5ag0965 | ATGGCATCATCTTCATCAAACTCCCCATGCGCAGCCTGCAAGTTTCTTCGCCGGAAGTGCCAACCTGAGTGCGTCTTCGCCCCCTACTTCCCGCCGGACCAGCCGCAAAAGTTCGCAAACGTTCACAAAGTGTTCGGAGCAAGCAACGTAAGCAAGCTACTTAACGAACTGCACCCTCACCAGAGAGAAGACGCGGTCAACTCTCTCGCCTACGAAGCCGATATGCGTCTCCGGGACCCGGTCTACGGCTGCGTCGGTGTAATCTCTCTCCTCCAGCACCAGCTCCGGCAGCTTCAGATGGACCTCACCTGCGCTAAGTCCGAGCTCTCTAAGTACCAAAATTTGGGCTTGACTAGCCACCATAGCCTCATAACGGCGCAGAATGGTCATCTAGGGTTTAATCTGATTGGTGGGGTCAACGCTGGCAATTGGCCGGAACAGCAGAACGGCCACTACCATCATCACCAGTTGTTTCCGAGGGACCCACAGCAGATCGTGATGAGGAGTTATGATCATAACGGGTCGAATCATTATGATGGAGGAAGTGCCCTTTTGGCTATGAATGTTTCGGCGACTATCGGTCAGCTCAGTCAGTTCCAGCAACCGGCTAGGGCTGCTGCCGAGGATGATCACCGCCGTACCATTGATCCCTCTTAG | 657 | 54.34 | MASSSSNSPCAACKFLRRKCQPECVFAPYFPPDQPQKFANVHKVFGASNVSKLLNELHPHQREDAVNSLAYEADMRLRDPVYGCVGVISLLQHQLRQLQMDLTCAKSELSKYQNLGLTSHHSLITAQNGHLGFNLIGGVNAGNWPEQQNGHYHHHQLFPRDPQQIVMRSYDHNGSNHYDGGSALLAMNVSATIGQLSQFQQPARAAAEDDHRRTIDPS | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4129039 | 4129695 | - | Conep05aG0099100.1 | Cone5ag0965 | 437983 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cone5ag0965 | 218 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 7 | 153 | - | - | |
Cone5ag0965 | 218 | Pfam | Lateral organ boundaries (LOB) domain | 9 | 106 | IPR004883 | - | |
Cone5ag0965 | 218 | Coils | Coil | 88 | 115 | - | - | |
Cone5ag0965 | 218 | ProSiteProfiles | LOB domain profile. | 8 | 109 | IPR004883 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cone2ag0868 | Cone-Chr2:34633696 | Cone5ag0965 | Cone-Chr5:4129039 | 1.51E-30 | dispersed | |
Cone5ag0965 | Cone-Chr5:4129039 | Cone6ag1377 | Cone-Chr6:11057520 | 2.37E-56 | dispersed | |
Cone1ag0847 | Cone-Chr1:54241388 | Cone5ag0965 | Cone-Chr5:4129039 | 8.51E-160 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
46163 | PF03226 | Yippee-Mis18 | 1.10E-14 | CL0080 | Cone | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cone5ag0965 | - | - | - | 0.0 |