Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cone5ag1023 ATGTCGCAGAACTCAGGGACCATGCCTTCTTTCAAGTTGATAAAATCATTGCCAGTTGATTACCGATTCATGGGATCATCAACCTCTGATCATTTGGTTACTCCGGAAAATGGTGTTTATGATAATAAAACGGTTGTTGGAGTCGAGAATTATGTTGCCCATGTTGAAGTAAATGAGGATTCCCCATATGGTGATAATATGATGTTGGTTGAAGACAGGCCTGCTATGAGTGATGAAGACTCTGCTTCTGTGGCTTTGCCTTCTCCTTCAATCTCTAGCGCACGCAATGAGCACAGATGGGGTGACACCTCCTCTTATGCAGTGAAGAAGATGATTAATTCTTGGTTTCAACTTCCAAATGGGACTTGGGAGCTGGTTAAAATATTATCAACTTCAGGAATAGAGTCTGTTGTTTCACTTCCTGATGGCAAGGTTTTAAAGGTAAAAACTGAAAGTTTGCTACCAGCAAATCCTGATATCCTAGATGGTGTAGATGATCTGATGCAACTTAGTTATTTAAACGAGCCTTCAGTGCTATACAATCTTCAGTACAGATACAATCAAGATATGATTTATACAAAAGCTGGACCTGTATTGGTTGCTGTCAACCCTTTTAAGAAAGTTCCCTTGTACGGAAATGATTTCATTGAAGCATATAAGCTTAAATCTATGGAGAGTCCGCATGTATATGCCATTACAGATACAGCCATCCGAGAAATGGTCCGAGATGAAGTAAATCAATCTATCATTATAAGTGGTGAAAGTGGAGCGGGAAAAACCGAAACAGCAAAGATAGCAATGCAGTATTTGGCCACCCTTGGTGGTGGAAGTGGGATAGAGTATGAAATATTGAAAACAAATCCGATCTTAGAAGCCTTTGGCAATGCAAAAACATTGAGAAATGACAACTCAAGTCGCTTTGGAAAATTGATTGAAATCCACTTCAGTGAAACAGGAAAAATATCTGGTGCCAATATTCAAACTTTTTTGCTTGAGAAGTCTAGAGTGGTCCAGTGCATGGAGGGTGAAAGGTCATATCATATATTTTACCAGCTCTGTGCTGGAGCTCCATCTGCTCTTAGAGAGATGCTGAATTTGAAGAGTGCAGATGAGTACAAGTATCTGAGGCAGAGTAATTGTTATTCAATTACTGGGGTTGATGATGCTGATCAATTTCGTATAGTCATGGAAGCTCTAGATGTTGTGCATATCAGCAAAGAGGATCAAGAAAGTGTATTTTCTGTGCTTGCTGCTGTGCTGTGGCTGGGAAATGTGTCGTTTGCTGTGATAGACAATGAGAACCATGTTGAAGCATTGGCTGATGAATGTCTATCCTCAGTTGCTAGACTGATTGGATGTAATGTTGAGGAACTTAATCTAGCTTTAACCTCTCGAAAAATGACTGTCAGGAATGAGGATATTGTCCAAAAGCTTACACTACCACAAGCGATAGATGCAAGAGATGCTTTGGCGAAGTATATATATGCTTGTCTATTTGAGTGGCTGGTTGAACAAATCAACAAATCTCTTGCTGTAGGGAAACGGCGTACTGGCAGATCCATCAGCATTCTTGATATCTATGGCTTTGAATCATTTGATAGGAATAGTTTTGAGCAATTCTGCATTAACTATGCAAATGAAAGATTGCAGCAACATTTCAATCGTCATTTATTCAAGCTGGAGCAGGAGGAGTACATCCAAGATGGTATTGACTGGGCAAAAGTAGATTTCGATGATAACCAGGACTGTCTCAGTCTTTTTGAAAAGAAACCTTTGGGATTGCTGTCCCTGCTAGATGAGGAGTCCACTTTCCCAAACGGCACAGATTTAACCTTTGCCAACAAGCTTAAGCAGCATTTGAACTCTAATTCTTGTTTCAGGGGAGAAAGAGGTCAAGGCTTTACTGTTAGTCATTATGCAGGAGAGGTTACATATGACACAACTGGATTTCTGGAGAAAAACAGGGACTTACTGCACCTAGATTCTATTCAACTCCTATCTTCATGCTCATGCCACCTTCCTCAGAAATTTGCTGCTGACATGCTTGATCATTCCAAAAAATCTGTTACTGGACCTTTACATAAATCTGGTGGTGCAGATTCCCAAAAGCTAAGTGTAGCAACTAAATTTAAGGGTCAATTGTTCCAGTTGTTGCAACGTCTAGAGAATACTACACCTCATTTCATACGATGTATCAAGCCAAACAATCTTCAATCTCCTGGGTTATATGAGCAAGAACTTGTACTGCAGCAGCTGAGATGCTGTGGAGTCTTAGAGGTAGTTCGGATATCAAGATCAGGATTTCCTACCAGAATGACTCACCAAAAGTTTGCTAGAAGGTACGGATTTCTACTACTGGAGAGTGTCGCTTCTCAGGATCCATTGAGTGTTTCAGTTGCAATTCTTCACCAATTCAATATAATGCCAGACATGTACCAAGTTGGCTATACAAAATTATTTTTCCGAACTGGACAGATTGGGGTGCTTGAAGATACAAGAAACTGCACCCTTCATGGCATCTTACGTGTTCAAAGCTGCTTCAGGGGGTACCAAGCTCGCTGCCACCTCAAGGAGCTGAGGCGAGGAATTGCAACTCTTCAGTCATTTATACGTGGAGTAAACACGAGAAAGGAGTATGCAATCTTACTTCAGAGACACAGAGCTGCTATTAAAATACAGAAGCAGAGTAAAAGCAGAATTTTAAGAAACCAGTTCAAGGATACTTGTGATGCATCAGTCACAATTCAATCAGTCATACGTGGCTGGTTGGTAAGGAGGTGCTCAGGAAATATAGGATCGCTGATATCTGGGGAAAGAAAGGTAAATGAGTTGGATGAGGTCCTTGTGAAGTCGTCATTCCTTGCAGAATTACAACGCAGAGTTCTTAAGGCTGAGGCTGGTTTGAGAGAAAAAGAAGAAGAGAATGAGATCCTACACCAACGCCTCCAACAGTATGATAACCGTTGGTCAGAATACGAGCTGAAAATGAAGTCAATGGAAGAAGTATGGCAGAAGCAGATGAGATCACTACAATCCAGCCTCTCCATTGCAAAGAAGAGCTTAGCTATTGATGATTCTGCGAGAAATTCTGATGCATCTGTAAATGCAAGTGAAGAAAGAGACTACAGCTGGGAAACAGGAAGTAACAATAATAGAGAGAGCAATGGGATGAGACCAATGAATGCAGGTCTTAGTGTTATAAGCCGATTGGCTGAAGAATTCGAGCAGAGGAGTCAGGTATTTGGCGACGATGCAAAATTCTTAGTAGAGGTTAAGTCTGGTCAGGTTGAAGCAAGTCTTGATCCAGATAAGGAACTCAGAAGATTGAAGCAGATTTTCGAAGGTTGGAAGAAGGAATATGGGGTGAGACTACGGGAAACAAAGGTGATTTTGAACAGGCTTGGCACTGAAAACTCAGGTGATAAGGCGAAAAAGAAATGGTGGGGCAGGTTAAACAGCTCGAGGATTAATTAA 3474 40.99 MSQNSGTMPSFKLIKSLPVDYRFMGSSTSDHLVTPENGVYDNKTVVGVENYVAHVEVNEDSPYGDNMMLVEDRPAMSDEDSASVALPSPSISSARNEHRWGDTSSYAVKKMINSWFQLPNGTWELVKILSTSGIESVVSLPDGKVLKVKTESLLPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQDMIYTKAGPVLVAVNPFKKVPLYGNDFIEAYKLKSMESPHVYAITDTAIREMVRDEVNQSIIISGESGAGKTETAKIAMQYLATLGGGSGIEYEILKTNPILEAFGNAKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCMEGERSYHIFYQLCAGAPSALREMLNLKSADEYKYLRQSNCYSITGVDDADQFRIVMEALDVVHISKEDQESVFSVLAAVLWLGNVSFAVIDNENHVEALADECLSSVARLIGCNVEELNLALTSRKMTVRNEDIVQKLTLPQAIDARDALAKYIYACLFEWLVEQINKSLAVGKRRTGRSISILDIYGFESFDRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFDDNQDCLSLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFRGERGQGFTVSHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSCSCHLPQKFAADMLDHSKKSVTGPLHKSGGADSQKLSVATKFKGQLFQLLQRLENTTPHFIRCIKPNNLQSPGLYEQELVLQQLRCCGVLEVVRISRSGFPTRMTHQKFARRYGFLLLESVASQDPLSVSVAILHQFNIMPDMYQVGYTKLFFRTGQIGVLEDTRNCTLHGILRVQSCFRGYQARCHLKELRRGIATLQSFIRGVNTRKEYAILLQRHRAAIKIQKQSKSRILRNQFKDTCDASVTIQSVIRGWLVRRCSGNIGSLISGERKVNELDEVLVKSSFLAELQRRVLKAEAGLREKEEENEILHQRLQQYDNRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAIDDSARNSDASVNASEERDYSWETGSNNNRESNGMRPMNAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLDPDKELRRLKQIFEGWKKEYGVRLRETKVILNRLGTENSGDKAKKKWWGRLNSSRIN 1157
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 4441363 4452600 + Conep05aG0105000.1 Cone5ag1023 438041
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cone5ag1023 1157 ProSiteProfiles IQ motif profile. 885 914 - -
Cone5ag1023 1157 ProSiteProfiles IQ motif profile. 859 888 - -
Cone5ag1023 1157 PANTHER MYOSIN 115 1129 - GO:0000146(PANTHER)|GO:0005737(PANTHER)|GO:0007015(PANTHER)|GO:0015629(PANTHER)|GO:0030050(PANTHER)|GO:0031982(PANTHER)|GO:0051015(PANTHER)
Cone5ag1023 1157 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 109 158 IPR004009 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 Gene3D Myosin VI head, motor domain, U50 subdomain 405 702 - -
Cone5ag1023 1157 Gene3D - 767 836 - -
Cone5ag1023 1157 Gene3D - 530 724 - -
Cone5ag1023 1157 Gene3D - 344 403 - -
Cone5ag1023 1157 PRINTS Myosin heavy chain signature 246 271 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 PRINTS Myosin heavy chain signature 520 548 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 PRINTS Myosin heavy chain signature 573 601 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 PRINTS Myosin heavy chain signature 288 315 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 PRINTS Myosin heavy chain signature 192 211 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 SMART iq_5 835 857 IPR000048 GO:0005515(InterPro)
Cone5ag1023 1157 SMART iq_5 884 906 IPR000048 GO:0005515(InterPro)
Cone5ag1023 1157 SMART iq_5 907 929 IPR000048 GO:0005515(InterPro)
Cone5ag1023 1157 SMART iq_5 858 880 IPR000048 GO:0005515(InterPro)
Cone5ag1023 1157 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 136 882 IPR027417 -
Cone5ag1023 1157 MobiDBLite consensus disorder prediction 1027 1058 - -
Cone5ag1023 1157 Pfam Myosin head (motor domain) 164 822 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 SMART MYSc_2a 156 835 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 FunFam Unconventional myosin-XIX 532 724 - -
Cone5ag1023 1157 Gene3D Kinesin motor domain 165 763 IPR036961 -
Cone5ag1023 1157 ProSiteProfiles IQ motif profile. 838 865 - -
Cone5ag1023 1157 Gene3D - 887 929 - -
Cone5ag1023 1157 Gene3D - 839 886 - -
Cone5ag1023 1157 CDD MYSc_Myo8 176 822 IPR036022 -
Cone5ag1023 1157 FunFam Myosin heavy chain 344 400 - -
Cone5ag1023 1157 ProSiteProfiles IQ motif profile. 910 937 - -
Cone5ag1023 1157 ProSiteProfiles Myosin motor domain profile. 162 834 IPR001609 GO:0003774(InterPro)|GO:0005524(InterPro)|GO:0016459(InterPro)
Cone5ag1023 1157 Coils Coil 954 988 - -
Cone5ag1023 1157 Pfam IQ calmodulin-binding motif 860 879 IPR000048 GO:0005515(InterPro)
Cone5ag1023 1157 Pfam IQ calmodulin-binding motif 911 926 IPR000048 GO:0005515(InterPro)
Cone5ag1023 1157 Pfam IQ calmodulin-binding motif 840 857 IPR000048 GO:0005515(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cone14ag1087 Cone-Chr14:9103051 Cone5ag1023 Cone-Chr5:4441363 0 dispersed
Cone15ag1098 Cone-Chr15:9008926 Cone5ag1023 Cone-Chr5:4441363 0 dispersed
Cone4ag0805 Cone-Chr4:5072247 Cone5ag1023 Cone-Chr5:4441363 1.58E-190 dispersed
Cone5ag1023 Cone-Chr5:4441363 Cone6ag0113 Cone-Chr6:541407 0 dispersed
Cone1ag0804 Cone-Chr1:53956245 Cone5ag1023 Cone-Chr5:4441363 0 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cone5ag1023 - - - 0.0